RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 OR5L1Q8NGL2 311 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 OR2AJ1Q8NGZ0 328 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 ST7LQ8TDW4 575 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF582Q96NG8 517 aaPredicted RBP14.87□□□□□ -0.03
HDDC3-205ENST00000559898 RBM4Q9BWF3 364 aaKnown RBP14.87□□□□□ -0.03
HDDC3-205ENST00000559898 CDADC1Q9BWV3 514 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 TSSK6Q9BXA6 273 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 TRIM15Q9C019 465 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 TMEM165Q9HC07 324 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 TBC1D23Q9NUY8 699 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 PCDHB10Q9UN67 800 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 COMMD3-BMI1R4GMX3 469 aa14.87□□□□□ -0.03
HDDC3-205ENST00000559898 A0A1B0GWJ7 208 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 KRT36O76013 467 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 SLC2A1P11166 492 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF92Q03936 586 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 MPPED2Q15777 294 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 SLC36A3Q495N2 470 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 TMEM155Q4W5P6 130 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 LYPD2Q6UXB3 125 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 DHFR2Q86XF0 187 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 BCL6BQ8N143 479 aaPredicted RBP14.86□□□□□ -0.03
HDDC3-205ENST00000559898 IQCF1Q8N6M8 205 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 OR13G1Q8NGZ3 307 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 CCDC124Q96CT7 223 aaKnown RBP14.86□□□□□ -0.03
HDDC3-205ENST00000559898 COG8Q96MW5 612 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 NMNAT2Q9BZQ4 307 aa14.86□□□□□ -0.03
HDDC3-205ENST00000559898 J3QLI3 93 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 J3QW42 95 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 M0R135 149 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 WNT2P09544 360 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 PRKXP51817 358 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 HILS1P60008 231 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 PAX2Q02962 417 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 TRIM25Q14258 630 aaKnown RBP14.85□□□□□ -0.03
HDDC3-205ENST00000559898 MICAQ29983 383 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 SPATS1Q496A3 300 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 GLYATL3Q5SZD4 288 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 OR2T5Q6IEZ7 315 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 DCXRQ7Z4W1 244 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 LNX2Q8N448 690 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 ZDHHC22Q8N966 263 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 OR52L1Q8NGH7 329 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 OR2T29Q8NH02 315 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF799Q96GE5 643 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 TMEM246Q9BRR3 403 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 PPP1R3EQ9H7J1 279 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 UFSP2Q9NUQ7 469 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 TMEM100Q9NV29 134 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 NDE1Q9NXR1 346 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 TAS2R1Q9NYW7 299 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 SAMHD1Q9Y3Z3 626 aaKnown RBP14.85□□□□□ -0.03
HDDC3-205ENST00000559898 N6AMT1Q9Y5N5 214 aa14.85□□□□□ -0.03
HDDC3-205ENST00000559898 IGHV3OR16-10A0A075B7F0 116 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 FAM183AA6NL82 134 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 C3orf80F5H4A9 247 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ACOT8O14734 319 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 FOXH1O75593 365 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 SPARCP09486 303 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF823P16415 610 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF12P17014 697 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 SPI1P17947 270 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 CA6P23280 308 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 MDH2P40926 338 aaKnown RBP14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF154Q13106 437 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 LINC01590Q5TEZ4 76 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ADGRG5Q8IZF4 528 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 HS3ST5Q8IZT8 346 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 KLHL36Q8N4N3 616 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 SPICQ8N5J4 248 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 NANPQ8TBE9 248 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF418Q8TF45 676 aaPredicted RBP14.84□□□□□ -0.03
HDDC3-205ENST00000559898 TAF15Q92804 592 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDDC3-205ENST00000559898 DUX5Q96PT3 197 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 AMELYQ99218 206 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 MAGIXQ9H6Y5 334 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 ZNF69Q9UC07 566 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 POLR3KQ9Y2Y1 108 aaPredicted RBP14.84□□□□□ -0.03
HDDC3-205ENST00000559898 INSIG2Q9Y5U4 225 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 DOCK11Q5JSL3 2073 aa14.84□□□□□ -0.03
HDDC3-205ENST00000559898 A8MXK9 166 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF593O00488 134 aaPredicted RBP14.83□□□□□ -0.04
HDDC3-205ENST00000559898 SURF4O15260 269 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 FAM20BO75063 409 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 OTX1P32242 354 aaPredicted RBP14.83□□□□□ -0.04
HDDC3-205ENST00000559898 CD80P33681 288 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 RAD23AP54725 363 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 KLBQ86Z14 1044 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 OR10G2Q8NGC3 310 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 OR2T4Q8NH00 348 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF48Q96MX3 618 aaPredicted RBP14.83□□□□□ -0.04
HDDC3-205ENST00000559898 DGCR6LQ9BY27 220 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 CENPMQ9NSP4 180 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 DDX28Q9NUL7 540 aaKnown RBP14.83□□□□□ -0.04
HDDC3-205ENST00000559898 PPIAL4AQ9Y536 164 aa14.83□□□□□ -0.04
HDDC3-205ENST00000559898 A0A0A6YYJ9 748 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 HAX1O00165 279 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 FCN3O75636 299 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 FAM107AO95990 144 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 SRP9P49458 86 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms