RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 OR5L1Q8NGL2 311 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 SYNPRQ8TBG9 265 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 PIGTQ969N2 578 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 RHNO1Q9BSD3 238 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 PTTG3PQ9NZH4 202 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 MYEF2Q9P2K5 600 aaKnown RBP18.6■□□□□ 0.57
SNX1-206ENST00000559389 MYRFQ9Y2G1 1151 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 ROS1P08922 2347 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 IRGMA1A4Y4 181 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 C5orf63A6NC05 138 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 OVOL3O00110 214 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 MAGEB4O15481 346 aaPredicted RBP18.59■□□□□ 0.57
SNX1-206ENST00000559389 DNASE1P24855 282 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 KLF3P57682 345 aaPredicted RBP18.59■□□□□ 0.57
SNX1-206ENST00000559389 SNRPD2P62316 118 aaKnown RBP18.59■□□□□ 0.57
SNX1-206ENST00000559389 JAM3Q9BX67 310 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 FGF20Q9NP95 211 aaPredicted RBP18.59■□□□□ 0.57
SNX1-206ENST00000559389 INPP5EQ9NRR6 644 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 PLCXD1Q9NUJ7 323 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 DSCAMO60469 2012 aa18.59■□□□□ 0.57
SNX1-206ENST00000559389 DAPL1A0PJW8 107 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 CYSRT1A8MQ03 144 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 XPNPEP2O43895 674 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 CLPTM1O96005 669 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 KRT8P05787 483 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 ANXA2P07355 339 aaKnown RBP18.58■□□□□ 0.56
SNX1-206ENST00000559389 PIPP12273 146 aaPredicted RBP18.58■□□□□ 0.56
SNX1-206ENST00000559389 GCH1P30793 250 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 ZNF829Q3KNS6 432 aaPredicted RBP18.58■□□□□ 0.56
SNX1-206ENST00000559389 CDONQ4KMG0 1287 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 FBXW12Q6X9E4 464 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 MBD6Q96DN6 1003 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 CXorf56Q9H5V9 222 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 SP140LQ9H930 580 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 FAM206AQ9NX38 181 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 DUSP13Q9UII6 198 aa18.58■□□□□ 0.56
SNX1-206ENST00000559389 RTTNQ86VV8 2226 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 A0A1W2PPW3 197 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 FAM20BO75063 409 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 SRSF10O75494 262 aaKnown RBP18.57■□□□□ 0.56
SNX1-206ENST00000559389 SULT1C4O75897 302 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 IGHV3-13P01766 116 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 ADRA2AP08913 450 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 MFGE8Q08431 387 aaPredicted RBP18.57■□□□□ 0.56
SNX1-206ENST00000559389 C6orf141Q5SZD1 244 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 GLYATL3Q5SZD4 288 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 PLEKHG7Q6ZR37 379 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 FAM57BQ71RH2 274 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 OR52H1Q8NGJ2 320 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 SNX33Q8WV41 574 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 CNBD2Q96M20 576 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 ZNF649Q9BS31 505 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 CACNG6Q9BXT2 260 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 BRD7Q9NPI1 651 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 ERVK13-1Q9NX77 482 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 CNOT2Q9NZN8 540 aaKnown RBP18.57■□□□□ 0.56
SNX1-206ENST00000559389 PSORS1C1Q9UIG5 152 aa18.57■□□□□ 0.56
SNX1-206ENST00000559389 FLNBO75369 2602 aaKnown RBP18.56■□□□□ 0.56
SNX1-206ENST00000559389 EFCAB10A6NFE3 127 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 METTL15A6NJ78 407 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 H7C417 338 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 M0R233 179 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 SLC1A7O00341 560 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 XRCC2O43543 280 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 RAC2P15153 192 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 PPOXP50336 477 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 MMP16P51512 607 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 SELENOVP59797 346 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ACTA2P62736 377 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ACTG2P63267 376 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 MALLQ13021 153 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 PSG7Q13046 419 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 GALEQ14376 348 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 FAM220AQ7Z4H9 259 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 YIPF7Q8N8F6 280 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 BPIFB6Q8NFQ5 453 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 PGAM5Q96HS1 289 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ALG8Q9BVK2 526 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 Q9H521 79 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 MOB1AQ9H8S9 216 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ZNF701Q9NV72 531 aaPredicted RBP18.56■□□□□ 0.56
SNX1-206ENST00000559389 BEX4Q9NWD9 120 aaPredicted RBP18.56■□□□□ 0.56
SNX1-206ENST00000559389 FKBP14Q9NWM8 211 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ZNF319Q9P2F9 582 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 FBXO9Q9UK97 447 aaPredicted RBP18.56■□□□□ 0.56
SNX1-206ENST00000559389 DIMT1Q9UNQ2 313 aaKnown RBP18.56■□□□□ 0.56
SNX1-206ENST00000559389 R4GMQ9 66 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 ABCA12Q86UK0 2595 aa18.56■□□□□ 0.56
SNX1-206ENST00000559389 TMEM269A0A1B0GVZ9 245 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 ACOD1A6NK06 481 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 TBX1O43435 398 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 BMP4P12644 408 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 KITLGP21583 273 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 DCKP27707 260 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 CDKN1AP38936 164 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 CSNK2BP67870 215 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 ZNF92Q03936 586 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 GK2Q14410 553 aaPredicted RBP18.55■□□□□ 0.56
SNX1-206ENST00000559389 HLXQ14774 488 aaPredicted RBP18.55■□□□□ 0.56
SNX1-206ENST00000559389 DEFB113Q30KQ7 82 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms