RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 GLTPQ9NZD2 209 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 EMC3Q9P0I2 261 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 HSF4Q9ULV5 492 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 RNF115Q9Y4L5 304 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 ENPP4Q9Y6X5 453 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 NAV3Q8IVL0 2385 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 LOC100509620A0A075B734 347 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 IGHV4-30-2A0A087WSY4 118 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 IGHV2OR16-5A0A0B4J2B6 119 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 EFCAB9A8MZ26 197 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF587BE7ETH6 402 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ACOT8O14734 319 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 WNT9BO14905 357 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ARHGEF9O43307 516 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SSX4O60224 188 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SMPD2O60906 423 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR6A2O95222 327 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 NGFP01138 241 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 IFNA2P01563 188 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 IGLV1-44P01699 117 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 HIST1H2ABP04908 130 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 MMP7P09237 267 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF35P13682 527 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF14P17017 642 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 PTAFRP25105 342 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 LMO1P25800 156 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 GTF2E2P29084 291 aaKnown RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 RRM2P31350 389 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 RPS27P42677 84 aaKnown RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 CAPZA2P47755 286 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CSNK1A1P48729 337 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC9A3P48764 834 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 FABP6P51161 128 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ATP5J2P56134 94 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 NAAAQ02083 359 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ST3GAL3Q11203 375 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 NPRL3Q12980 569 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 MAD2L1BPQ15013 274 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 TRAM2Q15035 370 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ADIPOQQ15848 244 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SGCAQ16586 387 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 MEP1BQ16820 701 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 Q5PR19 223 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR7E24Q6IFN5 339 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 KRT80Q6KB66 452 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF730Q6ZMV8 503 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 DNM1P46Q6ZS02 220 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC16A12Q6ZSM3 486 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 TMPRSS11FQ6ZWK6 438 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 MBOAT2Q6ZWT7 520 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 HIST3H2AQ7L7L0 130 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC30A8Q8IWU4 369 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC22A24Q8N4F4 322 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CCDC197Q8NCU1 140 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR4K5Q8NGD3 323 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR9Q2Q8NGE9 314 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR4C15Q8NGM1 316 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR8D4Q8NGM9 314 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR6X1Q8NH79 312 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF519Q8TB69 540 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 HIST1H2ACQ93077 130 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 NABP1Q96AH0 204 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLCO4A1Q96BD0 722 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC25A44Q96H78 314 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 MPP4Q96JB8 637 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SAMD8Q96LT4 415 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 PRRC1Q96M27 445 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SLC38A2Q96QD8 506 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 DDOQ99489 341 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 DOK1Q99704 481 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 BTBD10Q9BSF8 475 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CACNG6Q9BXT2 260 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 PLA2G12AQ9BZM1 189 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 OR10A4Q9H209 315 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 TXNIPQ9H3M7 391 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 FN3KQ9H479 309 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ESRP2Q9H6T0 727 aaKnown RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 EGLN3Q9H6Z9 239 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 FKRPQ9H9S5 495 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CACYBPQ9HB71 228 aaKnown RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 INIPQ9NRY2 104 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF701Q9NV72 531 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 TMEM38BQ9NVV0 291 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 TREM2Q9NZC2 230 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CRNNQ9UBG3 495 aaPredicted RBP3.62□□□□□ -1.83
SPG11-211ENST00000558561 ZNF229Q9UJW7 825 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 POFUT2Q9Y2G5 429 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 MED31Q9Y3C7 131 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 IER3IP1Q9Y5U9 82 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 U3KQV3 271 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 SVEP1Q4LDE5 3571 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 CUBNO60494 3623 aa3.62□□□□□ -1.83
SPG11-211ENST00000558561 NIPBLQ6KC79 2804 aaeCLIP3.62□□□□□ -1.83
SPG11-211ENST00000558561 SONP18583 2426 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 A0A096LNT2 108 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ARPC4-TTLL3A0A0A6YYG9 625 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms