RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MRPL37Q9BZE1 423 aaKnown RBP11.75□□□□□ -0.53
SHMT2-234ENST00000557703 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 SLC22A4Q9H015 551 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ZDHHC8Q9ULC8 765 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 NOP16Q9Y3C1 178 aaKnown RBP11.75□□□□□ -0.53
SHMT2-234ENST00000557703 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
SHMT2-234ENST00000557703 SELENOFO60613 162 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 FADS2O95864 444 aaKnown RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 NGFP01138 241 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 LCATP04180 440 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 DBHP09172 617 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 NAA10P41227 235 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 SLC6A9P48067 706 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 MMP16P51512 607 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 ART1P52961 327 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 ATP5J2P56134 94 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 MRPS11P82912 194 aaKnown RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 RAB40BQ12829 278 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF829Q3KNS6 432 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 RFPL4BQ6ZWI9 263 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 KRT77Q7Z794 578 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF283Q8N7M2 679 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 CYGBQ8WWM9 190 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 DYNLRB1Q9NP97 96 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-234ENST00000557703 STARD10Q9Y365 291 aa11.74□□□□□ -0.53
SHMT2-234ENST00000557703 A0A1W2PPW3 197 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 ENTPD6O75354 484 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 RIDAP52758 137 aaKnown RBP11.73□□□□□ -0.53
SHMT2-234ENST00000557703 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 TESK1Q15569 626 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 NKPD1Q17RQ9 610 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 OTPQ5XKR4 325 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-234ENST00000557703 PLEKHG7Q6ZR37 379 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 C8orf59Q8N0T1 100 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-234ENST00000557703 OR51G2Q8NGK0 314 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 SLC7A6Q92536 515 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 TFAP2CQ92754 450 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 MOB1AQ9H8S9 216 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 DNAJC27Q9NZQ0 273 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
SHMT2-234ENST00000557703 EXOGQ9Y2C4 368 aaKnown RBP11.73□□□□□ -0.53
SHMT2-234ENST00000557703 C17orf100A8MU93 164 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 ATP6V1G2O95670 118 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 TACSTD2P09758 323 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 CX3CR1P49238 355 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 CXCR4P61073 352 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 ISL1P61371 349 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 IL5RAQ01344 420 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 DBPQ10586 325 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 PSG7Q13046 419 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 MRPL28Q13084 256 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 MAD2L1BPQ15013 274 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 USP51Q70EK9 711 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 BCDIN3DQ7Z5W3 292 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 KLBQ86Z14 1044 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 FTMTQ8N4E7 242 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 ACBD7Q8N6N7 88 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 UBE2FQ969M7 185 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 CMBLQ96DG6 245 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 SYT3Q9BQG1 590 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 OR10A2Q9H208 303 aa11.72□□□□□ -0.53
SHMT2-234ENST00000557703 PURGQ9UJV8 347 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
SHMT2-234ENST00000557703 OTOGQ6ZRI0 2925 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 A0A0U1RQV5 110 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 A0A1B0GWJ7 208 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 J3QRE1 110 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 M0R129 80 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 NDUFS8O00217 210 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 KRT8P05787 483 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 ADRA2AP08913 450 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 PSKH1P11801 424 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 TNFSF4P23510 183 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 DCKP27707 260 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 MMP15P51511 669 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 PRKXP51817 358 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 ACTA2P62736 377 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 ACTG2P63267 376 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 MED21Q13503 144 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 MSMPQ1L6U9 139 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 PRSS45Q7RTY3 260 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 THAP5Q7Z6K1 395 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 CCDC54Q8NEL0 328 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 OR13G1Q8NGZ3 307 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms