RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 J3QLW9 94 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 ANXA2P07355 339 aaKnown RBP13.15□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF19P17023 458 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 PRSS12P56730 875 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 PPP1CBP62140 327 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 MFGE8Q08431 387 aaPredicted RBP13.15□□□□□ -0.3
NEDD1-213ENST00000557644 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 ARL9Q6T311 187 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 PPP1R14AQ96A00 147 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 C4orf36Q96KX1 117 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 JAM3Q9BX67 310 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 ERVK-18Q9QC07 812 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 HS3ST1O14792 307 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF254O75437 659 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 CDK1P06493 297 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 GLRXP35754 106 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 PSMA6P60900 246 aaKnown RBP13.14□□□□□ -0.31
NEDD1-213ENST00000557644 ITPR2Q14571 2701 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 OR2G6Q5TZ20 316 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 SLC25A40Q8TBP6 338 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 RNF166Q96A37 237 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-213ENST00000557644 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-213ENST00000557644 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 LIME1Q9H400 295 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 FAM206AQ9NX38 181 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 TMEM269A0A1B0GVZ9 245 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 SULT1C4O75897 302 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 MYL12AP19105 171 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 PSMB10P40306 273 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 FABP6P51161 128 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-213ENST00000557644 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
NEDD1-213ENST00000557644 OR2AE1Q8NHA4 323 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 FBXW5Q969U6 566 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
NEDD1-213ENST00000557644 SRSF10O75494 262 aaKnown RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 OR4A8P0C604 315 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 RGS6P49758 472 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 TMEM255AQ5JRV8 349 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 RORBQ92753 470 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 MARS2Q96GW9 593 aaKnown RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 EXOSC1Q9Y3B2 195 aaKnown RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 TBX1O43435 398 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 HTR1AP08908 422 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 MPV17P39210 176 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 ACTA2P62736 377 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 ACTG2P63267 376 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 DOC2BQ14184 412 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 RGS7BPQ6MZT1 257 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 FAM220AQ7Z4H9 259 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 KLF14Q8TD94 323 aaPredicted RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 MYDGFQ969H8 173 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 DHRS9Q9BPW9 319 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 SYT3Q9BQG1 590 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
NEDD1-213ENST00000557644 MYEF2Q9P2K5 600 aaKnown RBP13.13□□□□□ -0.31
NEDD1-213ENST00000557644 E9PI62 339 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 CLPTM1O96005 669 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 SOD3P08294 240 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 DCTDP32321 178 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 MMP16P51512 607 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF829Q3KNS6 432 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 GLYATL3Q5SZD4 288 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 SPRYD4Q8WW59 207 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 PGAM5Q96HS1 289 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 SIGLEC11Q96RL6 698 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 MRPL37Q9BZE1 423 aaKnown RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 DUSP13Q9UII6 198 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 CMAHPQ9Y471 501 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 R4GMQ9 66 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 APOC1P02654 83 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 TTKP33981 857 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 SERPINF1P36955 418 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 ZNF92Q03936 586 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 UNQ6126/PRO20091Q6UXV3 157 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 MUC15Q8N387 334 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 GATAD2BQ8WXI9 593 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 CCDC90BQ9GZT6 254 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 PBOV1Q9GZY1 135 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 G6PC2Q9NQR9 355 aa13.12□□□□□ -0.31
NEDD1-213ENST00000557644 CHCHD3Q9NX63 227 aaKnown RBP13.12□□□□□ -0.31
NEDD1-213ENST00000557644 LOC110117498-PIK3R3F6TDL0 507 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 RGS10O43665 173 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 MT-ND2P03891 347 aa13.11□□□□□ -0.31
NEDD1-213ENST00000557644 RPS23P62266 143 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms