RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 HLXQ14774 488 aaPredicted RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 ZSCAN26Q16670 478 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 TSTQ16762 297 aaKnown RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 SLC16A9Q7RTY1 509 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 ZNF283Q8N7M2 679 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 RNF133Q8WVZ7 376 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 TRUB1Q8WWH5 349 aaKnown RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 ZNF582Q96NG8 517 aaPredicted RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 C9orf16Q9BUW7 83 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 YIPF3Q9GZM5 350 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 EGLN1Q9GZT9 426 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 MSL2Q9HCI7 577 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 CCDC182A6NF36 153 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 ZSCAN5BA6NJL1 495 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 IQCF6A8MYZ5 107 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 LYNX1G3V0Z9 82 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 SELENOFO60613 162 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 NCR1O76036 304 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 HEXAP06865 529 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 H2BFMP0C1H6 154 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 LYNX1P0DP58 116 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 ALOX5APP20292 161 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 TNFSF4P23510 183 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 PRKXP51817 358 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 CDC42P60953 191 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 GGTLC2Q14390 218 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 GK2Q14410 553 aaPredicted RBP9.09□□□□□ -0.95
LINC00239-201ENST00000556973 OR2T2Q6IF00 324 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 KCTD18Q6PI47 426 aaPredicted RBP9.09□□□□□ -0.95
LINC00239-201ENST00000556973 ZBTB49Q6ZSB9 765 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 USP51Q70EK9 711 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 PGAP1Q75T13 922 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 GID4Q8IVV7 300 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 OR8G5Q8NG78 346 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 OR8J1Q8NGP2 316 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 OR13G1Q8NGZ3 307 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 GTF3AQ92664 365 aaKnown RBP9.09□□□□□ -0.95
LINC00239-201ENST00000556973 HRASLS5Q96KN8 279 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 IL4I1Q96RQ9 567 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 AMELYQ99218 206 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 BPESC1Q9GZL8 116 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 SAP30LQ9HAJ7 183 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 TMEM100Q9NV29 134 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 HAO2Q9NYQ3 351 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 LAMP5Q9UJQ1 280 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 TMEM14AQ9Y6G1 99 aa9.09□□□□□ -0.95
LINC00239-201ENST00000556973 XRCC2O43543 280 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 CDC14BO60729 498 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 RP2O75695 350 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 TACSTD2P09758 323 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 OPRL1P41146 370 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 NAA10P41227 235 aaPredicted RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 GPR6P46095 362 aaPredicted RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 CX3CR1P49238 355 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 HCCSP53701 268 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 TNFAIP6P98066 277 aaPredicted RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF92Q03936 586 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 HFEQ30201 348 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 SNAI3Q3KNW1 292 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 ZIK1Q3SY52 487 aaPredicted RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 DEGS2Q6QHC5 323 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 Q6ZR03 302 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 MRPL21Q7Z2W9 205 aaKnown RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 BCDIN3DQ7Z5W3 292 aaKnown RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 KRT77Q7Z794 578 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 OR5AS1Q8N127 324 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 OR2Z1Q8NG97 314 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 OR52H1Q8NGJ2 320 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 ASB17Q8WXJ9 295 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 RFKQ969G6 155 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 YIPF5Q969M3 257 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 EME1Q96AY2 570 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 ELMOD3Q96FG2 381 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 MNTQ99583 582 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 SLC29A1Q99808 456 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 REPIN1Q9BWE0 567 aaKnown RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 OPA3Q9H6K4 179 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 NIPAL2Q9H841 368 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF275Q9NSD4 429 aaPredicted RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 WARS2Q9UGM6 360 aaKnown RBP9.08□□□□□ -0.96
LINC00239-201ENST00000556973 IL19Q9UHD0 177 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 N6AMT1Q9Y5N5 214 aa9.08□□□□□ -0.96
LINC00239-201ENST00000556973 MAP1AP78559 2803 aaPredicted RBP9.07□□□□□ -0.96
LINC00239-201ENST00000556973 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 E9PQ18 207 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 M0R129 80 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 PHYHO14832 338 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF254O75437 659 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 ANXA2P07355 339 aaKnown RBP9.07□□□□□ -0.96
LINC00239-201ENST00000556973 TNFRSF1AP19438 455 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 HTR1FP30939 366 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 DDOSTP39656 456 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 CHN2P52757 468 aa9.07□□□□□ -0.96
LINC00239-201ENST00000556973 TMED1Q13445 227 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms