RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IL11P20809 199 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MPZP25189 248 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 GSK3AP49840 483 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 BIDP55957 195 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CLRN1P58418 232 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SRSF4Q08170 494 aaKnown RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 NR0B2Q15466 257 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TAF13Q15543 124 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FAM189A2Q15884 450 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 HYAL4Q2M3T9 481 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MOGAT2Q3SYC2 334 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 LY6G6FQ5SQ64 297 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 THEM4Q5T1C6 240 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 AWAT2Q6E213 333 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FAHD2BQ6P2I3 314 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 CORO6Q6QEF8 472 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 WDR74Q6RFH5 385 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF813Q6ZN06 617 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CD163Q86VB7 1156 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SLC25A42Q86VD7 318 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 COMMD2Q86X83 199 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CCDC36Q8IYA8 594 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 KCNRGQ8N5I3 272 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 EIF4E3Q8N5X7 224 aaKnown RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 DTWD2Q8NBA8 298 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 INO80EQ8NBZ0 244 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 BVESQ8NE79 360 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PXT1Q8NFP0 134 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR4S1Q8NGB4 309 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR2AJ1Q8NGZ0 328 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 OR1S1Q8NH92 325 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 THAP6Q8TBB0 222 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 STT3BQ8TCJ2 826 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 THAP3Q8WTV1 239 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ZNF501Q96CX3 271 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 WBP1Q96G27 269 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FAHD2AQ96GK7 314 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 ARL5BQ96KC2 179 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TGIF2Q9GZN2 237 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PBOV1Q9GZY1 135 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 TMEM185BQ9H7F4 350 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SDHAF3Q9NRP4 125 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 SERINC1Q9NRX5 453 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 FAM206AQ9NX38 181 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 MED29Q9NX70 200 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PPP4R1LQ9P1A2 415 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 PISDQ9UG56 409 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 CYB5R1Q9UHQ9 305 aa6.24□□□□□ -1.41
TDP1-213ENST00000555880 RPH3AQ9Y2J0 694 aaPredicted RBP6.24□□□□□ -1.41
TDP1-213ENST00000555880 CEP192Q8TEP8 1941 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 SZT2Q5T011 3432 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 RALGAPA1Q6GYQ0 2036 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ADAMTS9Q9P2N4 1935 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 LOC100509620A0A075B734 347 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TRAV14DV4A0A0A6YYC5 116 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 IGHV3-20A0A0C4DH32 117 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 A0A1W2PNV4 684 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 LIPT2A6NK58 231 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 FAM25EA8MYX2 175 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 H3BML4 177 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 SMAD9O15198 467 aaKnown RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 TPD52L2O43399 206 aaKnown RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 BCL2L11O43521 198 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 LMX1BO60663 402 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 STK17BO94768 372 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 IGHG1P01857 330 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 RLN2P04090 185 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 DCNP07585 359 aaKnown RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 FOSL2P15408 326 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 VAMP1P23763 118 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 MSX1P28360 303 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 LAP3P28838 519 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 DLSTP36957 453 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 CSNK1EP49674 416 aaKnown RBP6.23□□□□□ -1.41
TDP1-213ENST00000555880 PRKXP51817 358 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TAS2R31P59538 309 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 IL13RA1P78552 427 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 FOXF1Q12946 379 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 BTN1A1Q13410 526 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ZNF260Q3ZCT1 412 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 PXDC1Q5TGL8 231 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 C11orf87Q6NUJ2 197 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 C3orf33Q6P1S2 294 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TMEM81Q6P7N7 255 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ARSKQ6UWY0 536 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ACOT7LQ6ZUV0 252 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 RABEPKQ7Z6M1 372 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 TMEM17Q86X19 198 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 UEVLDQ8IX04 471 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ZNF101Q8IZC7 436 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 OR5L2Q8NGL0 311 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 OR13C8Q8NGS7 320 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 OR13C9Q8NGT0 318 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 NUBPLQ8TB37 319 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 ELP5Q8TE02 316 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 C11orf40Q8WZ69 217 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 PHYHIPLQ96FC7 376 aa6.23□□□□□ -1.41
TDP1-213ENST00000555880 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms