RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RBM4BQ9BQ04 359 aaKnown RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 COPS4Q9BT78 406 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 RBM4Q9BWF3 364 aaKnown RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 HCAR1Q9BXC0 346 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 REG4Q9BYZ8 158 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 OR2J1Q9GZK6 312 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 EGLN1Q9GZT9 426 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SEMA6AQ9H2E6 1030 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TPK1Q9H3S4 243 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SLC25A19Q9HC21 320 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 CENPMQ9NSP4 180 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SAC3D1A6NKF1 404 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 FAM183AA6NL82 134 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 F5H5K5 113 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF593O00488 134 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 SURF4O15260 269 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 GLCEO94923 617 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 GPANK1O95872 356 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 IGHV3-13P01766 116 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 LCATP04180 440 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 GYPBP06028 91 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 HEXAP06865 529 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 H2AFB2P0C5Z0 115 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 HSD11B1P28845 292 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 WNT5AP41221 380 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 RAD23AP54725 363 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ERVS71-1P61550 626 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 GRB2P62993 217 aaKnown RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 CDK5Q00535 292 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 EIF2B1Q14232 305 aaKnown RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 MAD2L1BPQ15013 274 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ALKBH6Q3KRA9 238 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 CCDC92Q53HC0 331 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 SLC35D3Q5M8T2 416 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 OTPQ5XKR4 325 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 SLC18B1Q6NT16 456 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ACSM5Q6NUN0 579 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 PLBD1Q6P4A8 553 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 FAHD1Q6P587 224 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 CXXC5Q7LFL8 322 aaKnown RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 DCXRQ7Z4W1 244 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 LRP11Q86VZ4 500 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ERI1Q8IV48 349 aaKnown RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF101Q8IZC7 436 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF525Q8N782 197 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF283Q8N7M2 679 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 KLF14Q8TD94 323 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-209ENST00000553855 RDH5Q92781 318 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 GABARAPL1Q9H0R8 117 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 TOR3AQ9H497 397 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 RIBC2Q9H4K1 309 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 NTN4Q9HB63 628 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 CYB5R1Q9UHQ9 305 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 LHFPL6Q9Y693 200 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 COMMD3-BMI1R4GMX3 469 aa7.14□□□□□ -1.27
PSEN1-209ENST00000553855 RAI1Q7Z5J4 1906 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 IGLV3-9A0A075B6K5 115 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM129A0AVI4 362 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 C17orf100A8MU93 164 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 C22orf46C9J442 243 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF878C9JN71 531 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 M0R135 149 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 SPRY3O43610 288 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 BAG2O95816 211 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CLPTM1O96005 669 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 NGFP01138 241 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 H2BFMP0C1H6 154 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 RAC2P15153 192 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 USF1P22415 310 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 GGT2P36268 569 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 DAPP51397 102 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CDC42P60953 191 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HIST1H3AP68431 136 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 PPP2R2BQ00005 443 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 SLC3A1Q07837 685 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 GGTLC2Q14390 218 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 PTGES3Q15185 160 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 TEX30Q5JUR7 227 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HIST2H3PS2Q5TEC6 136 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM236Q5W0B7 351 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CFAP77Q6ZQR2 320 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 RFPL4BQ6ZWI9 263 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HIST2H3AQ71DI3 136 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 MRPL21Q7Z2W9 205 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CPOQ8IVL8 374 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 THEM6Q8WUY1 208 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CMBLQ96DG6 245 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 SLAMF6Q96DU3 332 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ELMOD3Q96FG2 381 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF799Q96GE5 643 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 MARS2Q96GW9 593 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 MAP6Q96JE9 813 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HRASLS5Q96KN8 279 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF582Q96NG8 517 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 C9orf16Q9BUW7 83 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 NMNAT2Q9BZQ4 307 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms