RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TSPYL5Q86VY4 417 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 RBM45Q8IUH3 476 aaKnown RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 Q8N2B8 174 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 OR1F12Q8NHA8 337 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 AENQ8WTP8 325 aaKnown RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 C17orf50Q8WW18 174 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 DPF1Q92782 380 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 MAELQ96JY0 434 aaKnown RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 PRSS27Q9BQR3 290 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 HCAR1Q9BXC0 346 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 WDR55Q9H6Y2 383 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 PNPOQ9NVS9 261 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 HAO1Q9UJM8 370 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 VIMP08670 466 aaKnown RBP11.21□□□□□ -0.61
PRPF39-204ENST00000553605 IDO1P14902 403 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 LMO1P25800 156 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 POLR2JP52435 117 aaKnown RBP11.21□□□□□ -0.61
PRPF39-204ENST00000553605 PRSS12P56730 875 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 AANATQ16613 207 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 SLC2A7Q6PXP3 512 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 PFN4Q8NHR9 129 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 LRRC8CQ8TDW0 803 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 SGTBQ96EQ0 304 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 OR5M11Q96RB7 305 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 TMEM38AQ9H6F2 299 aa11.21□□□□□ -0.61
PRPF39-204ENST00000553605 IGHV3OR15-7A0A075B7D8 119 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 ZFPL1O95159 310 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 HOXB9P17482 250 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-204ENST00000553605 CD83Q01151 205 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 AQP6Q13520 282 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 OR8G1Q15617 311 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 CCDC92Q53HC0 331 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-204ENST00000553605 ALG10Q5BKT4 473 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 PLPP7Q8NBV4 271 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 OR4D11Q8NGI4 311 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 CHID1Q9BWS9 393 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 INPP5EQ9NRR6 644 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 ZIM2Q9NZV7 527 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 LYSTQ99698 3801 aa11.2□□□□□ -0.62
PRPF39-204ENST00000553605 A0A1B0GW55 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 PTBP3O95758 552 aaKnown RBP11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L2P0CJ85 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L3P0CJ86 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L4P0CJ87 422 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L5P0CJ88 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L6P0CJ89 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L7P0CJ90 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 PAX6P26367 422 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 BMXP51813 675 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 NKAPLQ5M9Q1 402 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 TEX36Q5VZQ5 186 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4L9Q6RFH8 374 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-204ENST00000553605 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 SDR9C7Q8NEX9 313 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 GPR32P1Q8NGA4 272 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 OR9I1Q8NGQ6 314 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 C8orf46Q8TAG6 207 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 MAP6Q96JE9 813 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 CCL13Q99616 98 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 DUX4Q9UBX2 424 aa11.19□□□□□ -0.62
PRPF39-204ENST00000553605 SF3B6Q9Y3B4 125 aaKnown RBP11.19□□□□□ -0.62
PRPF39-204ENST00000553605 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 A6NIZ1 184 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 ANGPTL7O43827 346 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 TYROBPO43914 113 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 LHBP01229 141 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 IGF2P01344 180 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 CD247P20963 164 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 CA6P23280 308 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 CTXN1P60606 82 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 RAP1BP61224 184 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 RAP1AP62834 184 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 GK2Q14410 553 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-204ENST00000553605 OTPQ5XKR4 325 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 ZNF826PQ6ZT77 177 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 NKAIN4Q8IVV8 208 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 MSRB3Q8IXL7 192 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 PIFOQ8TCI5 191 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 TMEM255BQ8WV15 326 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-204ENST00000553605 CDCA4Q9BXL8 241 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
PRPF39-204ENST00000553605 SDR39U1Q9NRG7 319 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-204ENST00000553605 SLAMF8Q9P0V8 285 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 ATPIF1Q9UII2 106 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 PRPF19Q9UMS4 504 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms