RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CMBLQ96DG6 245 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PLEKHA8Q96JA3 519 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 OR8B2Q96RD0 313 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CPPED1Q9BRF8 314 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SLC30A2Q9BRI3 323 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PCGF1Q9BSM1 259 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 ALG12Q9BV10 488 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SIRPDQ9H106 197 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 TUBG2Q9NRH3 451 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 INIPQ9NRY2 104 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 STX18Q9P2W9 335 aaKnown RBP6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CTSZQ9UBR2 303 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CLN8Q9UBY8 286 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SLC13A4Q9UKG4 626 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 ANGPT4Q9Y264 503 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 TIMM10BQ9Y5J6 103 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 A0A0U1RQK1 487 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 ZNF879B4DU55 563 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 P2RY10O00398 339 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 DOK2O60496 412 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 FCN3O75636 299 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 DNAJC8O75937 253 aaPredicted RBP6□□□□□ -1.45
ATXN3-219ENST00000553488 TSPAN9O75954 239 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 OPN1MWP04001 364 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 HIST1H2ABP04908 130 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 CSF1P09603 554 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 OPN1MW2P0DN77 364 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 OPN1MW3P0DN78 364 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 NR2C1P13056 603 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 MSR1P21757 451 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 PPIBP23284 216 aaKnown RBP6□□□□□ -1.45
ATXN3-219ENST00000553488 PCBD1P61457 104 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 HOXA4Q00056 320 aaPredicted RBP6□□□□□ -1.45
ATXN3-219ENST00000553488 KRT71Q3SY84 523 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 DCDC5Q6ZRR9 648 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 HIST3H2AQ7L7L0 130 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 MOGAT3Q86VF5 341 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 NKAIN4Q8IVV8 208 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 OR5AS1Q8N127 324 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 TBC1D15Q8TC07 691 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 TMEM255BQ8WV15 326 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 SLC7A6Q92536 515 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 HIST1H2ACQ93077 130 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 TAMM41Q96BW9 452 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 TXNIPQ9H3M7 391 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 POLE4Q9NR33 117 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 ACOXLQ9NUZ1 547 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 THAP1Q9NVV9 213 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 STARD10Q9Y365 291 aa6□□□□□ -1.45
ATXN3-219ENST00000553488 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 DNAH1Q9P2D7 4330 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 IGHV1-69DA0A0B4J2H0 117 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 IGHV3-64DA0A0J9YX35 117 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 A0A1W2PPL8 197 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 OR6C6A6NF89 314 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 F5H5P2 479 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 RGS16O15492 202 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-219ENST00000553488 IGHV1-69P01742 117 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 FUT1P19526 365 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 RBM34P42696 430 aaKnown RBP5.99□□□□□ -1.45
ATXN3-219ENST00000553488 HTR5AP47898 357 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 RAD23AP54725 363 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 RPL27P61353 136 aaKnown RBP5.99□□□□□ -1.45
ATXN3-219ENST00000553488 FHL1Q13642 323 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 SELPLGQ14242 412 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 FAM189A2Q15884 450 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 RUNDC3AQ59EK9 446 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 TTMPQ5BVD1 217 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 CLEC12AQ5QGZ9 265 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 ARL9Q6T311 187 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 DLEU7Q6UYE1 221 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 FBXW12Q6X9E4 464 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 GDPGP1Q6ZNW5 385 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 MREGQ8N565 214 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 LRRC75AQ8NAA5 344 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 C11orf65Q8NCR3 313 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 OR8G5Q8NG78 346 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 Q8TCH9 128 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 LRRC8CQ8TDW0 803 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 SPDL1Q96EA4 605 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 SGTBQ96EQ0 304 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 WDFY2Q96P53 400 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 EMC7Q9NPA0 242 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 ZNRD1Q9P1U0 126 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 CORO2BQ9UQ03 480 aa5.99□□□□□ -1.45
ATXN3-219ENST00000553488 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
ATXN3-219ENST00000553488 C12orf71A8MTZ7 269 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 IQCF6A8MYZ5 107 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 M0QX08 132 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 SGCEO43556 437 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 PIP5K1CO60331 668 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 TOX4O94842 621 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 SRP9P49458 86 aaKnown RBP5.98□□□□□ -1.45
ATXN3-219ENST00000553488 NPY4RP50391 375 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 SCRN3Q0VDG4 424 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 COX10Q12887 443 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 MAB21L1Q13394 359 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 ALG10Q5BKT4 473 aa5.98□□□□□ -1.45
ATXN3-219ENST00000553488 DHRS7BQ6IAN0 325 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-219ENST00000553488 OR2T2Q6IF00 324 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 369.7 ms