RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 BLMHQ13867 455 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 BCL2L15Q5TBC7 163 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 TMEM244Q5VVB8 128 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 TUBA1AQ71U36 451 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 PRSS45Q7RTY3 260 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 ELMOD2Q8IZ81 293 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 ACBD4Q8NC06 268 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 FAM222BQ8WU58 562 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 NDUFB11Q9NX14 153 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 ST6GALNAC2Q9UJ37 374 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 OR52A1Q9UKL2 312 aa13.89□□□□□ -0.19
PRPF40A-212ENST00000545856 CADP27708 2225 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 LOC100509620A0A075B734 347 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 IGHV1-18A0A0C4DH31 117 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 TRBV2A0A0J9YWF9 115 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 C5orf49A4QMS7 147 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 F5H5K5 113 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 CECR9P0C854 216 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF35P13682 527 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 GABRA5P31644 462 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 RAD52P43351 418 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF121P58317 390 aaPredicted RBP13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 RPS23P62266 143 aaKnown RBP13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 GALK2Q01415 458 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 RSPO1Q2MKA7 263 aaPredicted RBP13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 YIF1BQ5BJH7 314 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 BEX5Q5H9J7 111 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 GDPGP1Q6ZNW5 385 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 SPATC1Q76KD6 591 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 BCL7BQ9BQE9 202 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 G6PC2Q9NQR9 355 aa13.88□□□□□ -0.19
PRPF40A-212ENST00000545856 OR4C45A6NMZ5 311 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 PSMD9O00233 223 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 CASKO14936 926 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 RPP14O95059 124 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 HLA-DPB1P04440 258 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 THBDP07204 575 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 ANXA2P07355 339 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 HSMCR30P0CW71 290 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 CELP19835 753 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 ACHEP22303 614 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 CCL1P22362 96 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 PRKXP51817 358 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 NAAAQ02083 359 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 MALLQ13021 153 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 GPR141Q7Z602 305 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 OR5AK2Q8NH90 309 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 RNF166Q96A37 237 aaPredicted RBP13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 SPSB4Q96A44 273 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 C10orf35Q96D05 121 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 PBOV1Q9GZY1 135 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 NPDC1Q9NQX5 325 aaPredicted RBP13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 NDUFA13Q9P0J0 144 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF281Q9Y2X9 895 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 ADGRG4Q8IZF6 3080 aa13.87□□□□□ -0.19
PRPF40A-212ENST00000545856 IGHV2OR16-5A0A0B4J2B6 119 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 MTRF1O75570 445 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 INMTO95050 263 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 LALBAP00709 142 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 IGLV3-1P01715 115 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 CD40P25942 277 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 MAPK3P27361 379 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 GP2P55259 537 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 CDSNQ15517 529 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 WDR38Q5JTN6 314 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 PAMR1Q6UXH9 720 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 Q6ZSR3 168 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 PHC2Q8IXK0 858 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF676Q8N7Q3 588 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 PGLYRP3Q96LB9 341 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 NPAP1Q9NZP6 1156 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 FRRS1LQ9P0K9 344 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 HHLA2Q9UM44 414 aa13.86□□□□□ -0.19
PRPF40A-212ENST00000545856 A0A1W2PR80 420 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 M0R1B8 84 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 MAGEB4O15481 346 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 GATBO75879 557 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 PNPP00491 289 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 LCATP04180 440 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 DBHP09172 617 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 ZNF83P51522 516 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 NANOS3P60323 173 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 ZBTB37Q5TC79 503 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 DOK3Q7L591 496 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 WFDC8Q8IUA0 241 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 DMRTC2Q8IXT2 367 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 PRSS35Q8N3Z0 413 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 FTMTQ8N4E7 242 aa13.85□□□□□ -0.19
PRPF40A-212ENST00000545856 PLPP7Q8NBV4 271 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms