RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PPIAL4F	P0DN26	164 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	PSKH1	P11801	424 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	ANXA8	P13928	327 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	CPT2	P23786	658 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	GK2	Q14410	553 aa	Predicted RBP	11.31	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF181	Q2M3W8	571 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	LYPD4	Q6UWN0	246 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	DRAM2	Q6UX65	266 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	IL17REL	Q6ZVW7	336 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	CELF2-AS1	Q8N7Q2	184 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	ST7L	Q8TDW4	575 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	ITLN1	Q8WWA0	313 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	TMEM158	Q8WZ71	300 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF799	Q96GE5	643 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	OR2V2	Q96R30	315 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	WDR76	Q9H967	626 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015	PDP1	Q9P0J1	537 aa	Predicted RBP	11.31	□□□□□ -0.6
POLE-222	ENST00000545015	DNAJB9	Q9UBS3	223 aa		11.31	□□□□□ -0.6
POLE-222	ENST00000545015		J3QLI3	93 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	GNGT2	O14610	69 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	PHF1	O43189	567 aa	Predicted RBP	11.3	□□□□□ -0.6
POLE-222	ENST00000545015	MLNR	O43193	412 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	PLPP2	O43688	288 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	LCAT	P04180	440 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	OSM	P13725	252 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	GATA3	P23771	443 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	GATA4	P43694	442 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	CDK5	Q00535	292 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	MALL	Q13021	153 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	DCXR	Q7Z4W1	244 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	NAA40	Q86UY6	237 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	SPATA24	Q86W54	205 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	LRRC28	Q86X40	367 aa	Predicted RBP	11.3	□□□□□ -0.6
POLE-222	ENST00000545015	TEX29	Q8N6K0	151 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF511	Q8NB15	262 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	OR51L1	Q8NGJ5	315 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	DNAJC9	Q8WXX5	260 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	SLCO4A1	Q96BD0	722 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	MEGF10	Q96KG7	1140 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	KCNJ15	Q99712	375 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	GAL3ST1	Q99999	423 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	REPIN1	Q9BWE0	567 aa	Known RBP	11.3	□□□□□ -0.6
POLE-222	ENST00000545015	CADM1	Q9BY67	442 aa	Known RBP	11.3	□□□□□ -0.6
POLE-222	ENST00000545015	GCM1	Q9NP62	436 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	DCAF16	Q9NXF7	216 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	PPP1R3C	Q9UQK1	317 aa		11.3	□□□□□ -0.6
POLE-222	ENST00000545015	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.3	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF878	C9JN71	531 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015		F5H0A9	414 aa	Predicted RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015		H3BN98	237 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	TMEM178B	H3BS89	294 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF593	O00488	134 aa	Predicted RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	ATP5H	O75947	161 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	GLCE	O94923	617 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	PTBP3	O95758	552 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	PNP	P00491	289 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	HMGN1	P05114	100 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	GYPB	P06028	91 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	CLU	P10909	449 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	RPS27	P42677	84 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SRP9	P49458	86 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	RASSF2	P50749	326 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	MMP16	P51512	607 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	BTG1	P62324	171 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SHQ1	Q6PI26	577 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	PGAP1	Q75T13	922 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	TIGD4	Q8IY51	512 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	OR5AS1	Q8N127	324 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SPIC	Q8N5J4	248 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	RFLNB	Q8N5W9	214 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	ATG16L2	Q8NAA4	619 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	ERGIC1	Q969X5	290 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	UTP4	Q969X6	686 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SPSB4	Q96A44	273 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SLAMF6	Q96DU3	332 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SLC22A4	Q9H015	551 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	TOR3A	Q9H497	397 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	OPA3	Q9H6K4	179 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	ZNF556	Q9HAH1	456 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	NTN4	Q9HB63	628 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	PATZ1	Q9HBE1	687 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015	LPAR2	Q9HBW0	351 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	SLC25A19	Q9HC21	320 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	TMEM100	Q9NV29	134 aa		11.29	□□□□□ -0.6
POLE-222	ENST00000545015	NOP16	Q9Y3C1	178 aa	Known RBP	11.29	□□□□□ -0.6
POLE-222	ENST00000545015		A8MXK9	166 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	PRODH	O43272	600 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	SPARC	P09486	303 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	PAICS	P22234	425 aa	Known RBP	11.28	□□□□□ -0.6
POLE-222	ENST00000545015	CD200	P41217	278 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	SLC15A1	P46059	708 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	RAD23A	P54725	363 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	GRB2	P62993	217 aa	Known RBP	11.28	□□□□□ -0.6
POLE-222	ENST00000545015	GINS1	Q14691	196 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	SNAI3	Q3KNW1	292 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	SHF	Q7M4L6	423 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	HS3ST5	Q8IZT8	346 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	PARP8	Q8N3A8	854 aa		11.28	□□□□□ -0.6
POLE-222	ENST00000545015	IQCF1	Q8N6M8	205 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms