RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 BHLHE40O14503 412 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 CNIH1O95406 144 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 SPEM2Q0P670 501 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD4-211ENST00000544484 ALKBH6Q3KRA9 238 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 PXT1Q8NFP0 134 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 OR2A5Q96R48 311 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 SAMD10Q9BYL1 202 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 PLEKHB1Q9UF11 243 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 FLVCR1Q9Y5Y0 555 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ZNF705GA8MUZ8 300 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 FAHP16930 419 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 EVX1P49640 407 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 SLC30A7Q8NEW0 376 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 OR1S2Q8NGQ3 325 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 TMEFF2Q9UIK5 374 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 GPANK1O95872 356 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 CBR1P16152 277 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 FOXC1Q12948 553 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ZNF266Q14584 549 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 OR52H1Q8NGJ2 320 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 LIN37Q96GY3 246 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 ARHGDIGQ99819 225 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 POLDIP2Q9Y2S7 368 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 HDGFL3Q9Y3E1 203 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 R4GN57 208 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 APC2O95996 2303 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 TRIP11Q15643 1979 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 IGHV1OR21-1A0A087WYE8 117 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 CXorf51AA0A1B0GTR3 108 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 ZNF117Q03924 483 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ASAH1Q13510 395 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ZFP82Q8N141 532 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 OPA3Q9H6K4 179 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 SPACA1Q9HBV2 294 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 FGF20Q9NP95 211 aaPredicted RBP11.56□□□□□ -0.56
CHD4-211ENST00000544484 TUBG2Q9NRH3 451 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ARID1AO14497 2285 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 TMUB2Q71RG4 321 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 OR2V1Q8NHB1 315 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 IGHV1OR15-9A0A0B4J2B8 117 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SH2D1BO14796 132 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■□□□□ 9.8
CHD4-211ENST00000544484 MPLP40238 635 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 ECI1P42126 302 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 EXD3Q8N9H8 876 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 GPR32P1Q8NGA4 272 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 TAAR9Q96RI9 348 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SHARPINQ9H0F6 387 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 EXOSC3Q9NQT5 275 aaKnown RBP11.55□□□□□ -0.56
CHD4-211ENST00000544484 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
CHD4-211ENST00000544484 MBTPS2O43462 519 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 GLAP06280 429 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SSTP61278 116 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 BTG1P62324 171 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 FMODQ06828 376 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 DMWDQ09019 674 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 MYBPHQ13203 477 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 TPBGQ13641 420 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 RBMS3Q6XE24 437 aaKnown RBP11.55□□□□□ -0.56
CHD4-211ENST00000544484 FAM185AQ8N0U4 392 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 CADM4Q8NFZ8 388 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 BOD1Q96IK1 185 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SCPEP1Q9HB40 452 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 FAM60AQ9NP50 221 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 CSAG2Q9Y5P2 127 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 PMS2P1A4D2B8 440 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 IL3RAP26951 378 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 DCTDP32321 178 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 HRH1P35367 487 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 LHFPL2Q6ZUX7 228 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 FIGNL2A6NMB9 653 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
CHD4-211ENST00000544484 NKX2-2O95096 273 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 HBE1P02100 147 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SELEP16581 610 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SSUH2Q9Y2M2 353 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 CCDC187A0A096LP49 1063 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 IMPA2O14732 288 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 ANGPTL7O43827 346 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 IL9P15248 144 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 RPS23P62266 143 aaKnown RBP11.55□□□□□ -0.56
CHD4-211ENST00000544484 ELFN2Q5R3F8 820 aa11.55□□□□□ -0.56
CHD4-211ENST00000544484 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms