RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 NPIPA5E9PKD4 350 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 H7C2Y5 167 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 CD79AP11912 226 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 NR0B1P51843 470 aaKnown RBP12.24□□□□□ -0.45
VPS33A-208ENST00000543633 SUMO3P55854 103 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-208ENST00000543633 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 VAX1Q5SQQ9 334 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 OR10K2Q6IF99 312 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 CD163Q86VB7 1156 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-208ENST00000543633 CARFQ8N187 725 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 OR10R2Q8NGX6 335 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 RNF141Q8WVD5 230 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 TSLPQ969D9 159 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 KLHDC7BQ96G42 594 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 NARS2Q96I59 477 aaKnown RBP12.24□□□□□ -0.45
VPS33A-208ENST00000543633 NPIPA1Q9UND3 350 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 MBTPS2O43462 519 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 PRKACAP17612 351 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 HRH1P35367 487 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 SLC6A9P48067 706 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 HFEQ30201 348 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 NSUN5P2Q63ZY6 315 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 DHRS7BQ6IAN0 325 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 BAP18Q8IXM2 172 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 GTPBP8Q8N3Z3 284 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 SCGB3A2Q96PL1 93 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 ZMAT3Q9HA38 289 aaKnown RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 FANCFQ9NPI8 374 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 MMP26Q9NRE1 261 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 ASF1BQ9NVP2 202 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 TRIOO75962 3097 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 H3BMH7 237 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 P2RY10O00398 339 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 CSN2P05814 226 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 VSIG8P0DPA2 414 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 ZP2Q05996 745 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 KLHL24Q6TFL4 600 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 RAB11FIP2Q7L804 512 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 GKN2Q86XP6 184 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 SPAG16Q8N0X2 631 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 OR5D14Q8NGL3 314 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 OR1N1Q8NGS0 311 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 GAL3ST1Q99999 423 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 KLHL13Q9P2N7 655 aa12.23□□□□□ -0.45
VPS33A-208ENST00000543633 ZNF629Q9UEG4 869 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-208ENST00000543633 F5P12259 2224 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 IGHV5-51A0A0C4DH38 117 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 A0A1W2PPC4 97 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 ANKUB1A6NFN9 424 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 MPZL1O95297 269 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 TTRP02766 147 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 VAMP1P23763 118 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 MAOBP27338 520 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 CBX5P45973 191 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 HOXA1P49639 335 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 DCDP81605 110 aaKnown RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 SMAD4Q13485 552 aaKnown RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 MICBQ29980 383 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 H1FNTQ75WM6 255 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 C17orf82Q86X59 251 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
VPS33A-208ENST00000543633 NUDCD2Q8WVJ2 157 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 DCUN1D4Q92564 292 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 FGGYQ96C11 551 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 CSAG2Q9Y5P2 127 aa12.22□□□□□ -0.45
VPS33A-208ENST00000543633 FAM25EA8MYX2 175 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 MS4A18H0YCH9 400 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 SYT7O43581 403 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 SSX5O60225 188 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 LMX1BO60663 402 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 SNAPINO95295 136 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 LIPCP11150 499 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 AVPR2P30518 371 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 SERPINF1P36955 418 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 EIF5AP63241 154 aaKnown RBP12.21□□□□□ -0.45
VPS33A-208ENST00000543633 CTAG1AP78358 180 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 RHOUQ7L0Q8 258 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 NAA40Q86UY6 237 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 OR52N4Q8NGI2 321 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 TERB2Q8NHR7 220 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 NKD1Q969G9 470 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 SAT2Q96F10 170 aaPredicted RBP12.21□□□□□ -0.45
VPS33A-208ENST00000543633 ZDHHC12Q96GR4 267 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 TGM7Q96PF1 710 aa12.21□□□□□ -0.45
VPS33A-208ENST00000543633 CHST11Q9NPF2 352 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms