RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	DPRX	A6NFQ7	191 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	OR5H1	A6NKK0	313 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	FAM25E	A8MYX2	175 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SULT2B1	O00204	365 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	FABP7	O15540	132 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	RAB36	O95755	333 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	CD8A	P01732	235 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SOD3	P08294	240 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ITGA5	P08648	1049 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	HKR1	P10072	659 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	IFI30	P13284	250 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	OSM	P13725	252 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZNF250	P15622	560 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	RHCE	P18577	417 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ATF4	P18848	351 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	STOM	P27105	288 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SLC1A3	P43003	542 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	CCR4	P51679	360 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SPIB	Q01892	262 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZNF91	Q05481	1191 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	BSPH1	Q075Z2	132 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	LGALS3BP	Q08380	585 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ACSM1	Q08AH1	577 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	EXOSC2	Q13868	293 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZNF273	Q14593	569 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SLC17A1	Q14916	467 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZNF672	Q499Z4	452 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TIMM23B	Q5SRD1	257 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MRPL2	Q5T653	305 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	RUSC1-AS1	Q66K80	236 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	C11orf71	Q6IPW1	123 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZNF770	Q6IQ21	691 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	CNIH2	Q6PI25	160 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	KLHL17	Q6TDP4	642 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	BHLHA15	Q7RTS1	189 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	WFDC8	Q8IUA0	241 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	OR8H3	Q8N146	312 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	EIF4E3	Q8N5X7	224 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ZIC4	Q8N9L1	334 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ATP6V1C2	Q8NEY4	427 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	VPS37A	Q8NEZ2	397 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	OR8J1	Q8NGP2	316 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	PIGX	Q8TBF5	258 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	GEMIN6	Q8WXD5	167 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TMEM45B	Q96B21	275 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MSI2	Q96DH6	328 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	PANX1	Q96RD7	426 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ATF6B	Q99941	703 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	C7orf50	Q9BRJ6	194 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	UQCC2	Q9BRT2	126 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	KATNB1	Q9BVA0	655 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	PRRG3	Q9BZD7	231 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	OR11A1	Q9GZK7	315 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SLITRK2	Q9H156	845 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MED28	Q9H204	178 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	PPIL3	Q9H2H8	161 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TMEM38A	Q9H6F2	299 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	UNKL	Q9H9P5	680 aa	Known RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TPT1P8	Q9HAU6	139 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	AMBN	Q9NP70	447 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SLCO1C1	Q9NYB5	712 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TAS2R16	Q9NYV7	291 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	COPZ2	Q9P299	210 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	NLK	Q9UBE8	527 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MGAT4A	Q9UM21	535 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MGAT4B	Q9UQ53	548 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	LAMP3	Q9UQV4	416 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	RNF115	Q9Y4L5	304 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	MAB21L2	Q9Y586	359 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	FLVCR1	Q9Y5Y0	555 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	NUBP2	Q9Y5Y2	271 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	SLC25A15	Q9Y619	301 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	ENPP4	Q9Y6X5	453 aa		5.58	□□□□□ -1.52
CIT-213	ENST00000543324	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	TMEM72	A0PK05	275 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	ZC3H12D	A2A288	527 aa	Known RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	OR6C65	A6NJZ3	312 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	LIPT2	A6NK58	231 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	FTCDNL1	E5RQL4	147 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	ABCD4	O14678	606 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	FRS3	O43559	492 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	NDUFS7	O75251	213 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	ENTPD6	O75354	484 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	SCO1	O75880	301 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	LYZL6	O75951	148 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	CPSF4	O95639	269 aa	Known RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	IFNA14	P01570	189 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	HMGN1	P05114	100 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	DBI	P07108	87 aa	Known RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	SULT1A3	P0DMM9	295 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	SULT1A4	P0DMN0	295 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	APEX1	P27695	318 aa	Known RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	CALCR	P30988	508 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	GABRA5	P31644	462 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	CHI3L1	P36222	383 aa	Predicted RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	CBX5	P45973	191 aa		5.57	□□□□□ -1.52
CIT-213	ENST00000543324	POLR2H	P52434	150 aa	Known RBP	5.57	□□□□□ -1.52
CIT-213	ENST00000543324	CDH12	P55289	794 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms