RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 SNTNA6NMZ2 147 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 DAOP14920 347 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 ALOX5APP20292 161 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 HTR1FP30939 366 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 MMP15P51511 669 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 PRKXP51817 358 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
DDX11-221ENST00000542661 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
DDX11-221ENST00000542661 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
DDX11-221ENST00000542661 TNK1Q13470 666 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 ALKBH6Q3KRA9 238 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 SLC25A30Q5SVS4 291 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 MEDAGQ5VYS4 303 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 DEGS2Q6QHC5 323 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 BCDIN3DQ7Z5W3 292 aaKnown RBP12.11□□□□□ -0.47
DDX11-221ENST00000542661 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 ZNF540Q8NDQ6 660 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 OPA3Q9H6K4 179 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 SMPD3Q9NY59 655 aaPredicted RBP12.11□□□□□ -0.47
DDX11-221ENST00000542661 TRIM64A6NGJ6 449 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 PHYHO14832 338 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 SLC16A6O15403 523 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 MPZL2O60487 215 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 LY6HO94772 140 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 ADH4P08319 380 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 MRPL3P09001 348 aaKnown RBP12.1□□□□□ -0.47
DDX11-221ENST00000542661 SLC25A16P16260 332 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 CX3CR1P49238 355 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
DDX11-221ENST00000542661 NAA40Q86UY6 237 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 ZNF555Q8NEP9 628 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 OR52H1Q8NGJ2 320 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 ZNF582Q96NG8 517 aaPredicted RBP12.1□□□□□ -0.47
DDX11-221ENST00000542661 AMELYQ99218 206 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 EGLN1Q9GZT9 426 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 DLL4Q9NR61 685 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 DECR2Q9NUI1 292 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 DNAJC27Q9NZQ0 273 aa12.1□□□□□ -0.47
DDX11-221ENST00000542661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX11-221ENST00000542661 NIPBLQ6KC79 2804 aaeCLIP12.09□□□□□ -0.47
DDX11-221ENST00000542661 LOC100130705A0A1B0GUX0 176 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 H7C1Q1 480 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 TPD52L2O43399 206 aaKnown RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 XRCC2O43543 280 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 ZNF254O75437 659 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 ANXA2P07355 339 aaKnown RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 SBK2P0C263 348 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 TNFSF4P23510 183 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 ATP6V1E1P36543 226 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 ROM1Q03395 351 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 CDK5R2Q13319 367 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 GK2Q14410 553 aaPredicted RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 CARTPTQ16568 116 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 OCLNQ16625 522 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 LRRC36Q1X8D7 754 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 PGAP1Q75T13 922 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 MRPL21Q7Z2W9 205 aaKnown RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 RDH5Q92781 318 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 COX4I2Q96KJ9 171 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 Q96MT0 163 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 MROQ9BYG7 248 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 VCXQ9H320 206 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 KLHDC2Q9Y2U9 406 aa12.09□□□□□ -0.47
DDX11-221ENST00000542661 CHD3Q12873 2000 aaKnown RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 SETD2Q9BYW2 2564 aaPredicted RBP12.09□□□□□ -0.47
DDX11-221ENST00000542661 IGHV4-30-2A0A087WSY4 118 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 ZSCAN5BA6NJL1 495 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 ACOD1A6NK06 481 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 IQCF6A8MYZ5 107 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 ZNF670-ZNF695F2Z2N8 137 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 CASQ2O14958 399 aaPredicted RBP12.08□□□□□ -0.48
DDX11-221ENST00000542661 SPRY3O43610 288 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 HPXP02790 462 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 INHBBP09529 407 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 CFL1P23528 166 aaKnown RBP12.08□□□□□ -0.48
DDX11-221ENST00000542661 GIFP27352 417 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 PEX2P28328 305 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 DCTDP32321 178 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 MAGEB1P43366 347 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 HCCSP53701 268 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
DDX11-221ENST00000542661 CCL8P80075 99 aa12.08□□□□□ -0.48
DDX11-221ENST00000542661 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms