RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GABRA1P14867 456 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ABOP16442 354 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 GUCA1AP43080 201 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 HIST1H3AP68431 136 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 MRPS34P82930 218 aaKnown RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ASAH1Q13510 395 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 RNPS1Q15287 305 aaKnown RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 RIPPLY2Q5TAB7 128 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 HIST2H3PS2Q5TEC6 136 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF585AQ6P3V2 769 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 HIST2H3AQ71DI3 136 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 CHMP1BQ7LBR1 199 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 AAED1Q7RTV5 226 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ELMOD2Q8IZ81 293 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF433Q8N7K0 673 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF671Q8TAW3 534 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 HTRA1Q92743 480 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 TRIB1Q96RU8 372 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 KCNJ15Q99712 375 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 GP6Q9HCN6 339 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 DHDHQ9UQ10 334 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ANXA2P2A6NMY6 339 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 RER1O15258 196 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 SS18L1O75177 396 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 TTRP02766 147 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ANXA2P07355 339 aaKnown RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ACSM4P0C7M7 580 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 CALCBP10092 127 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 CTSSP25774 331 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 AGTR1P30556 359 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 PTGER4P35408 488 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 SCAND1P57086 179 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 GRB2P62993 217 aaKnown RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 SGCAQ16586 387 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 C1orf185Q5T7R7 199 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 HES5Q5TA89 166 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ASPHD2Q6ICH7 369 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 TUSC5Q8IXB3 177 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 Q8N402 240 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-204ENST00000540846 TINAGQ9UJW2 476 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 CLEC4AQ9UMR7 237 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 FOXJ3Q9UPW0 622 aa10.94□□□□□ -0.66
SMAD3-204ENST00000540846 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 A0A0X1KG70 313 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 H3BSH0 61 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 PFDN1O60925 122 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 HOXD4P09016 255 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-204ENST00000540846 IGFBP3P17936 291 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-204ENST00000540846 HSD11B1P28845 292 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 NR4A2P43354 598 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 FAM27BQ5VT28 67 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 BAIAP2L2Q6UXY1 529 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 C3P1Q6ZMU1 363 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 GDPD3Q7L5L3 318 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 GPR137CQ8N3F9 429 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 OR13C3Q8NGS6 347 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 GMPPAQ96IJ6 420 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-204ENST00000540846 RBM24Q9BX46 236 aaKnown RBP10.93□□□□□ -0.66
SMAD3-204ENST00000540846 PRRG4Q9BZD6 226 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 PBOV1Q9GZY1 135 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 TP63Q9H3D4 680 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-204ENST00000540846 LIN7BQ9HAP6 207 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 TMEM38BQ9NVV0 291 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 CKLFQ9UBR5 152 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 ETV7Q9Y603 341 aa10.93□□□□□ -0.66
SMAD3-204ENST00000540846 FUOMA2VDF0 154 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 P2RY10O00398 339 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 PRRG2O14669 202 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 MAS1P04201 325 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 YES1P07947 543 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 SPNP16150 400 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 CEACAM8P31997 349 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-204ENST00000540846 PITPNBP48739 271 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 BCAP31P51572 246 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 MADCAM1Q13477 382 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 TAF13Q15543 124 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 C11orf91Q3C1V1 193 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 TRIQKQ629K1 86 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 PYHIN1Q6K0P9 492 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 NUFIP2Q7Z417 695 aaKnown RBP10.92□□□□□ -0.66
SMAD3-204ENST00000540846 GCNT2Q8N0V5 402 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 NAXEQ8NCW5 288 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 DNAAF1Q8NEP3 725 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 GJC3Q8NFK1 279 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 SLC25A38Q96DW6 304 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 ZNF837Q96EG3 531 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-204ENST00000540846 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-204ENST00000540846 WACQ9BTA9 647 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 CRLF2Q9HC73 371 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 EMC3Q9P0I2 261 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 RABL2AQ9UBK7 228 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-204ENST00000540846 OR5V1Q9UGF6 321 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 RABL2BQ9UNT1 228 aa10.92□□□□□ -0.66
SMAD3-204ENST00000540846 RELNP78509 3460 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 TNFSF13O75888 250 aa10.91□□□□□ -0.66
SMAD3-204ENST00000540846 C1QL1O75973 258 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms