RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	EIF3G	O75821	320 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NDUFB2	O95178	105 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RAB3D	O95716	219 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	APOC1	P02654	83 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IFI6	P09912	130 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AKAIN1	P0CW23	69 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PRSS3	P35030	304 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CLDN6	P56747	220 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		Q499Y3	187 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ACER2	Q5QJU3	275 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GLT8D1	Q68CQ7	371 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RPL13AP3	Q6NVV1	102 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ETV3L	Q6ZN32	361 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GATS	Q8NAP1	163 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PLPP7	Q8NBV4	271 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR14L1P	Q8NHC6	308 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PPP1R1C	Q8WVI7	109 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NAA11	Q9BSU3	229 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ALG12	Q9BV10	488 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF700	Q9H0M5	742 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	BIN3	Q9NQY0	253 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	COMMD9	Q9P000	198 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MRM2	Q9UI43	246 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CNTRL	Q7Z7A1	2325 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TRBV23-1	A0A0A0MS06	115 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LY6G6E	A0A0G2JKS1	128 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C13orf42	A0A1B0GVH6	325 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR5H15	A6NDH6	313 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ELOA3D	A6NLF2	546 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DCTN6	O00399	190 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AGPAT2	O15120	278 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HCRTR1	O43613	425 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HCRTR2	O43614	444 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FGF17	O60258	216 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GPRIN2	O60269	458 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CDC40	O60508	579 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	AHSA1	O95433	338 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	F13B	P05160	661 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CT62	P0C5K7	136 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RD3L	P0DJH9	198 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CALCB	P10092	127 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GDF1	P27539	372 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CD34	P28906	385 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HOXC12	P31275	282 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CDKN2A	P42771	156 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MRPS10	P82664	201 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C17orf67	Q0P5P2	114 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KLRB1	Q12918	225 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PDZK1IP1	Q13113	114 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C2orf76	Q3KRA6	126 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ELOA3B	Q3SY89	546 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KIRREL2	Q6UWL6	708 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GABRG1	Q8N1C3	465 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SVBP	Q8N300	66 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LINC00469	Q8N7U9	141 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	UNC13C	Q8NB66	2214 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMEM52	Q8NDY8	209 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ELOA3	Q8NG57	546 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR1J4	Q8NGS1	313 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR10R2	Q8NGX6	335 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RXFP4	Q8TDU9	374 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C8orf44	Q96CB5	159 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FAM173A	Q9BQD7	235 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TRIM2	Q9C040	744 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DUSP22	Q9NRW4	184 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TUBD1	Q9UJT1	453 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		U3KQA8	63 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DOCK9	Q9BZ29	2069 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A0B4J2E0	115 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A1B0GX12	115 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RNF222	A6NCQ9	220 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FIGNL2	A6NMB9	653 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	VSTM5	A8MXK1	200 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FOXS1	O43638	330 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ACAA1	P09110	424 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CSF1	P09603	554 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	EIF1	P41567	113 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	POLR2G	P62487	172 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DHRS2	Q13268	280 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PAN3	Q58A45	887 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PRAMEF17	Q5VTA0	474 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RAET1L	Q5VY80	246 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C3orf33	Q6P1S2	294 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF227	Q86WZ6	799 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	POMGNT2	Q8NAT1	580 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SFT2D1	Q8WV19	159 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TSEN15	Q8WW01	171 aa	Known RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TMED6	Q8WW62	240 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CMTM3	Q96MX0	182 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC19A3	Q9BZV2	496 aa		5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF629	Q9UEG4	869 aa	Predicted RBP	5.07	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A0B4J2A0	478 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A0D9SG52	128 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LOC101059948	A0A1B0GTJ6	334 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FRG2C	A6NGY1	282 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	VSTM2B	A6NLU5	285 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C10orf142	B7Z368	130 aa		5.06	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HLA-A	P01891	365 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms