RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GLDNQ6ZMI3 551 aaPredicted RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 FCRLAQ7L513 359 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 SPICQ8N5J4 248 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF433Q8N7K0 673 aaPredicted RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 THEM6Q8WUY1 208 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 FCAMRQ8WWV6 532 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 AMELYQ99218 206 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 MRPL13Q9BYD1 178 aaKnown RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 NOX3Q9HBY0 568 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 CA10Q9NS85 328 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 PLSCR5A0PG75 271 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 ACOD1A6NK06 481 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR8G3PP0DMU2 310 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 CXCL2P19875 107 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 RRADP55042 308 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 NHLRC3Q5JS37 347 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 GGNQ86UU5 652 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 ELMOD3Q96FG2 381 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 SRXN1Q9BYN0 137 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 MRM2Q9UI43 246 aaKnown RBP15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 FBXL3Q9UKT7 428 aa15.15■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR5H15A6NDH6 313 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 EIF1AYO14602 144 aaKnown RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CELA3AP09093 270 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 GIPP09681 153 aaPredicted RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CPN1P15169 458 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 PTH2RP49190 550 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 GLO1Q04760 184 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 RTP5Q14D33 572 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 STK11Q15831 433 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CARD17Q5XLA6 110 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 LRRC69Q6ZNQ3 347 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 GALNTL5Q7Z4T8 443 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 OTOSQ8NHW6 89 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 NSMAFQ92636 917 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 RNF166Q96A37 237 aaPredicted RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF552Q9H707 407 aaPredicted RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF69Q9UC07 566 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 MRPS18CQ9Y3D5 142 aaKnown RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 ANKRD20A5PA0PJZ0 165 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 SP1P08047 785 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 SUCLG1P53597 346 aaKnown RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLDN12P56749 244 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CSNK2A1P68400 391 aaPredicted RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 ADAM8P78325 824 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLN3Q13286 438 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 OLFML2AQ68BL7 652 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 C3P1Q6ZMU1 363 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 MDS2Q8NDY4 140 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 KCNE4Q8WWG9 221 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CXorf58Q96LI9 332 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF703Q9H7S9 590 aaPredicted RBP15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 FOXJ3Q9UPW0 622 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 CACNA1CQ13936 2221 aa15.14■□□□□ 0.01
PCDHB17P-201ENST00000539533 LOC102725191A0A1B0GVB3 256 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 GJE1A6NN92 205 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 FAM166BA8MTA8 275 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 L7N2F9 121 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 SULT1B1O43704 296 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 EIF1BO60739 113 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 RPP14O95059 124 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 SPARCP09486 303 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 ANXA7P20073 488 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 MAGEB1P43366 347 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 CCL11P51671 97 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 GFRA1P56159 465 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 SOX8P57073 446 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 LINC00303Q3SY05 128 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 FAAP20Q6NZ36 180 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 MEIOBQ8N635 442 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 MRPL48Q96GC5 212 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 SLC25A44Q96H78 314 aaPredicted RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 TTTY12Q9BZ98 90 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 IFT46Q9NQC8 304 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF281Q9Y2X9 895 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 RGS11O94810 467 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 PGA4P0DJD7 388 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 PGA3P0DJD8 388 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLDN15P56746 228 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 PSMA6P60900 246 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 TMEM69Q5SWH9 247 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 TFAP2EQ6VUC0 442 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 SYNPRQ8TBG9 265 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 S100A16Q96FQ6 103 aaKnown RBP15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 IKZF2Q9UKS7 526 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 V9GY05 133 aa15.13■□□□□ 0.01
PCDHB17P-201ENST00000539533 CREBL2O60519 120 aaPredicted RBP15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 FCER2P06734 321 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 PTHLHP12272 177 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 MAGEA5P43359 124 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLDN17P56750 224 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLRN1P58418 232 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 NANOS3P60323 173 aaKnown RBP15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 RAP2BP61225 183 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 LIPNQ5VXI9 398 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 SLC26A10Q8NG04 563 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 OR6X1Q8NH79 312 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 RPS4Y2Q8TD47 263 aa15.12■□□□□ 0.01
PCDHB17P-201ENST00000539533 RGP1Q92546 391 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms