RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CXXC5Q7LFL8 322 aaKnown RBP11.63□□□□□ -0.55
CD9-208ENST00000538834 ICA1LQ8NDH6 482 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 SNX33Q8WV41 574 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 ZMYND19Q96E35 227 aaPredicted RBP11.63□□□□□ -0.55
CD9-208ENST00000538834 ZNF799Q96GE5 643 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 SLC30A2Q9BRI3 323 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 ZNF275Q9NSD4 429 aaPredicted RBP11.63□□□□□ -0.55
CD9-208ENST00000538834 HAO2Q9NYQ3 351 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 TVP23BQ9NYZ1 205 aa11.63□□□□□ -0.55
CD9-208ENST00000538834 F5H5K5 113 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 SPARCP09486 303 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 IGFBP5P24593 272 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 SNAI3Q3KNW1 292 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 NXNL2Q5VZ03 156 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 KRT74Q7RTS7 529 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 ERI1Q8IV48 349 aaKnown RBP11.62□□□□□ -0.55
CD9-208ENST00000538834 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 OR8G5Q8NG78 346 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 OR6K6Q8NGW6 343 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 OR6N2Q8NGY6 317 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 TMEM163Q8TC26 289 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 HPS1Q92902 700 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 RBM4BQ9BQ04 359 aaKnown RBP11.62□□□□□ -0.55
CD9-208ENST00000538834 SOX7Q9BT81 388 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 OR51V1Q9H2C8 321 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 TOR3AQ9H497 397 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 MSL2Q9HCI7 577 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 S100A14Q9HCY8 104 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 PTTG3PQ9NZH4 202 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 ENOPH1Q9UHY7 261 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 KLHDC2Q9Y2U9 406 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 JMJD1CQ15652 2540 aa11.62□□□□□ -0.55
CD9-208ENST00000538834 PLSCR5A0PG75 271 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 MLNRO43193 412 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 SELENOFO60613 162 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 PTBP3O95758 552 aaKnown RBP11.61□□□□□ -0.55
CD9-208ENST00000538834 MT-ND5P03915 603 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 LMO4P61968 165 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
CD9-208ENST00000538834 APOFQ13790 326 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 EIF2B1Q14232 305 aaKnown RBP11.61□□□□□ -0.55
CD9-208ENST00000538834 TRIP10Q15642 601 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 ZMAT1Q5H9K5 638 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 OR2T2Q6IF00 324 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 SLC16A9Q7RTY1 509 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 YIPF3Q9GZM5 350 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 TMEM160Q9NX00 188 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 ZNF319Q9P2F9 582 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 IL19Q9UHD0 177 aa11.61□□□□□ -0.55
CD9-208ENST00000538834 CUBNO60494 3623 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 IGHV1-69-2A0A0G2JMI3 117 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 PRR32B1ATL7 298 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 WNT9BO14905 357 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 SPRY3O43610 288 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 TIMM8AO60220 97 aaPredicted RBP11.6□□□□□ -0.55
CD9-208ENST00000538834 LCATP04180 440 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 LYNP07948 512 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 IL2RGP31785 369 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 ROM1Q03395 351 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 ZNF92Q03936 586 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 KLHL12Q53G59 568 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 SLC25A30Q5SVS4 291 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 DEGS2Q6QHC5 323 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 USP51Q70EK9 711 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
CD9-208ENST00000538834 MEPCEQ7L2J0 689 aaKnown RBP11.6□□□□□ -0.55
CD9-208ENST00000538834 BCDIN3DQ7Z5W3 292 aaKnown RBP11.6□□□□□ -0.55
CD9-208ENST00000538834 ZNF283Q8N7M2 679 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 TCEANCQ8N8B7 351 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
CD9-208ENST00000538834 SIGLEC11Q96RL6 698 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 SLC29A1Q99808 456 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 TEX12Q9BXU0 123 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 CACNG2Q9Y698 323 aa11.6□□□□□ -0.55
CD9-208ENST00000538834 SAC3D1A6NKF1 404 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 M0R129 80 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 DLGAP1O14490 977 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 EI24O14681 340 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
CD9-208ENST00000538834 FSTL3O95633 263 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 IGLV3-1P01715 115 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 SELEP16581 610 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 DCTDP32321 178 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 GATA4P43694 442 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 SLC15A1P46059 708 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 GZMKP49863 264 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 ALDH3A2P51648 485 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 PRKXP51817 358 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
CD9-208ENST00000538834 GLYATL3Q5SZD4 288 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 PQLC1Q8N2U9 271 aa11.59□□□□□ -0.55
CD9-208ENST00000538834 OR13G1Q8NGZ3 307 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms