RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 C14orf28Q4W4Y0 310 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 HIKESHIQ53FT3 197 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 BEX5Q5H9J7 111 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 COA6Q5JTJ3 125 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 VAX1Q5SQQ9 334 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 LINC01590Q5TEZ4 76 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ABHD17CQ6PCB6 329 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ULK3Q6PHR2 472 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 Q6ZRG5 221 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 Q6ZVL8 140 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 DPPA2Q7Z7J5 298 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 CDC20BQ86Y33 519 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ZNF440Q8IYI8 595 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 FAM24BQ8N5W8 94 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ZNF676Q8N7Q3 588 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 FRMD1Q8N878 549 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 CDRT4Q8N9R6 151 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 BOLLQ8N9W6 283 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 LMNTD1Q8N9Z9 388 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 OR51D1Q8NGF3 324 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 OR52E1Q8NGJ3 308 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 OR5K2Q8NHB8 316 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ZNF461Q8TAF7 563 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 RNF128Q8TEB7 428 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 HOXB13Q92826 284 aaPredicted RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 FGF13Q92913 245 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 TMEM106AQ96A25 262 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 C16orf58Q96GQ5 468 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 SEC22AQ96IW7 307 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ADAD1Q96M93 576 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 CASD1Q96PB1 797 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 TNFRSF13CQ96RJ3 184 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ALG12Q9BV10 488 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 GPR61Q9BZJ8 451 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 SLC26A1Q9H2B4 701 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 PTGES2Q9H7Z7 377 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 SPACA1Q9HBV2 294 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 C20orf141Q9NUB4 165 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 USP36Q9P275 1121 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 DKKL1Q9UK85 242 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 OR52A1Q9UKL2 312 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 C19orf53Q9UNZ5 99 aaPredicted RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 V9GYS6 101 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 hCG_1809904A0A1W2PP81 198 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PR48 441 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PR64 198 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PRV1 198 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 TLCD2A6NGC4 264 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MARCH11A6NNE9 402 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 EEF1E1-BLOC1S5C9J1V9 151 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 RTCAO00442 366 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 CTSVO60911 334 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ERAL1O75616 437 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 EFEMP2O95967 443 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 CHRM2P08172 466 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 TMIGD3P0DMS9 266 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 OR5H8P0DN80 308 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 COX5BP10606 129 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ADRB3P13945 408 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 HIST1H1CP16403 213 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 IGFBP3P17936 291 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 FPR2P25090 351 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 AK4P27144 223 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 CTNNB1P35222 781 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 PSMB10P40306 273 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 RPS10P46783 165 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 CCR4P51679 360 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 AFF3P51826 1226 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 NDUFA6P56556 154 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 RPS23P62266 143 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 RPS4XP62701 263 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 CSNK1G2P78368 415 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 H3F3AP84243 136 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MEF2AQ02078 507 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 PMPCAQ10713 525 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 PNRC1Q12796 327 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 EIF3IQ13347 325 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 TSTA3Q13630 321 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 KIR3DS1Q14943 382 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ATXN7L3Q14CW9 347 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 ARL6IP1Q15041 203 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 PPA1Q15181 289 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 OR7A5Q15622 319 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 LRRC37A5PQ49AS3 106 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 FNDC3BQ53EP0 1204 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 SOHLH1Q5JUK2 328 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 CLLU1OSQ5K130 101 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 NCMAPQ5T1S8 102 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 AKR1C8PQ5T2L2 129 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MRPL2Q5T653 305 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 ZNF529Q6P280 563 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 VHLLQ6RSH7 139 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 RFLNAQ6ZTI6 216 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MED25Q71SY5 747 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 Q7L0L9 218 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 SLC35E3Q7Z769 313 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ZNF280BQ86YH2 543 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 LRRC25Q8N386 305 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 FAM71E2Q8N5Q1 922 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms