RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MMP15P51511 669 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 ZNF121P58317 390 aaPredicted RBP11.17□□□□□ -0.62
CHFR-216ENST00000538235 CXCR4P61073 352 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 MVKQ03426 396 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 MBNL2Q5VZF2 373 aaKnown RBP11.17□□□□□ -0.62
CHFR-216ENST00000538235 THEM6Q8WUY1 208 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 RNFT2Q96EX2 444 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 KCNJ15Q99712 375 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 APOL4Q9BPW4 351 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 BCL2L14Q9BZR8 327 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
CHFR-216ENST00000538235 DUSP13Q9UII6 198 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 F8P00451 2351 aa11.17□□□□□ -0.62
CHFR-216ENST00000538235 IGHV3-13P01766 116 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 MAGEB1P43366 347 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 SLC15A1P46059 708 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 PPOXP50336 477 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
CHFR-216ENST00000538235 ROM1Q03395 351 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 ZNF92Q03936 586 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 GK2Q14410 553 aaPredicted RBP11.16□□□□□ -0.62
CHFR-216ENST00000538235 Q5PR19 223 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 DHRSXQ8N5I4 330 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 SYNPRQ8TBG9 265 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 TRUB1Q8WWH5 349 aaKnown RBP11.16□□□□□ -0.62
CHFR-216ENST00000538235 SGCDQ92629 289 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 PIGTQ969N2 578 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 DCLRE1CQ96SD1 692 aaKnown RBP11.16□□□□□ -0.62
CHFR-216ENST00000538235 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 CLN6Q9NWW5 311 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
CHFR-216ENST00000538235 A0A096LNT2 108 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 LYNX1G3V0Z9 82 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 H0YL77 283 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 MLNRO43193 412 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 HPXP02790 462 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 LCATP04180 440 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 LYNX1P0DP58 116 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 KITLGP21583 273 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 RAD52P43351 418 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 MTNR1AP48039 350 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 ATP5J2P56134 94 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 PSMA6P60900 246 aaKnown RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 RPS23P62266 143 aaKnown RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 IL5RAQ01344 420 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 ECH1Q13011 328 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 ZNF322Q6U7Q0 402 aaPredicted RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 IZUMO2Q6UXV1 221 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 FAM57BQ71RH2 274 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 OR5AS1Q8N127 324 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 ZNF525Q8N782 197 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 ZNF283Q8N7M2 679 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 DVL3Q92997 716 aaPredicted RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 APOBEC3DQ96AK3 386 aaPredicted RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 ELOVL3Q9HB03 270 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 MSL2Q9HCI7 577 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 BRD7Q9NPI1 651 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 C8orf4Q9NR00 106 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 FAIMQ9NVQ4 179 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 DCAF16Q9NXF7 216 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 LAMP5Q9UJQ1 280 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 PURGQ9UJV8 347 aaKnown RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.62
CHFR-216ENST00000538235 CACNG2Q9Y698 323 aa11.15□□□□□ -0.62
CHFR-216ENST00000538235 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 TRIM64A6NGJ6 449 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 TRIM64BA6NI03 449 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 H0YAE9 185 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 M0R233 179 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 IGLV3-1P01715 115 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 IGHV1-46P01743 117 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 IGHA1P01876 353 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 SELEP16581 610 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 SLC6A9P48067 706 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 EVX1P49640 407 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 TPTEP56180 551 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 GRB2P62993 217 aaKnown RBP11.14□□□□□ -0.63
CHFR-216ENST00000538235 HOXA4Q00056 320 aaPredicted RBP11.14□□□□□ -0.63
CHFR-216ENST00000538235 CDK5R2Q13319 367 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 TP53I3Q53FA7 332 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 DRAM2Q6UX65 266 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 ZNF555Q8NEP9 628 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 OR10H4Q8NGA5 316 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 YIPF5Q969M3 257 aa11.14□□□□□ -0.63
CHFR-216ENST00000538235 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms