RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CNPY4Q8N129 248 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 GCSAMQ8N6F7 178 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 FAM216BQ8N7L0 139 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 LRRC75AQ8NAA5 344 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 PAPD5Q8NDF8 572 aaKnown RBP4.23□□□□□ -1.73
CHD4-205ENST00000536301 BEND2Q8NDZ0 799 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 OR5R1Q8NH85 324 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 TMEM255BQ8WV15 326 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 HIST1H2ACQ93077 130 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 ITCHQ96J02 903 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 MAP6Q96JE9 813 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 CLPTM1LQ96KA5 538 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 MAGEB18Q96M61 343 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 ZBTB18Q99592 522 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 CCL13Q99616 98 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 OCSTAMPQ9BR26 566 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 WNT10AQ9GZT5 417 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 PCDHAC1Q9H158 963 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 TXNIPQ9H3M7 391 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 VIPAS39Q9H9C1 493 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 SMURF2Q9HAU4 748 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 HAO1Q9UJM8 370 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 KPTNQ9Y664 436 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 CAPN7Q9Y6W3 813 aa4.23□□□□□ -1.73
CHD4-205ENST00000536301 SORL1Q92673 2214 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 TRBV5-3A0A0A0MS03 114 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 TRAPPC13A5PLN9 417 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 C12orf71A8MTZ7 269 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 EBAG9O00559 213 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 RER1O15258 196 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SLC22A3O75751 556 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 PAHP00439 452 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 CHRM2P08172 466 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 ZNF26P17031 533 aaPredicted RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 JUNBP17275 347 aaPredicted RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 CD247P20963 164 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SLC1A6P48664 564 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 DAP3P51398 398 aaKnown RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 MNAT1P51948 309 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 CRYBA2P53672 197 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 CTXN1P60606 82 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 PCBD1P61457 104 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SCRN3Q0VDG4 424 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 FADDQ13158 208 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 FHL1Q13642 323 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 LRRC75BQ2VPJ9 315 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 PLA1AQ53H76 456 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 WDR38Q5JTN6 314 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 PAGE3Q5JUK9 113 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 C11orf88Q6PI97 169 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 MAVSQ7Z434 540 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 WDR86Q86TI4 376 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 NAA40Q86UY6 237 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 TMEM219Q86XT9 240 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 ARMC8Q8IUR7 673 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 DYNAPQ8N1N2 210 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SPERTQ8NA61 448 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 OR11L1Q8NGX0 322 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 OR1F12Q8NHA8 337 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SLC7A13Q8TCU3 470 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 SGTBQ96EQ0 304 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 MAELQ96JY0 434 aaKnown RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 ZNF582Q96NG8 517 aaPredicted RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 OR52B2Q96RD2 323 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 DDOQ99489 341 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 ALG12Q9BV10 488 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 CDCA4Q9BXL8 241 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 PARD6BQ9BYG5 372 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 RANBP3Q9H6Z4 567 aaPredicted RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 ELL3Q9HB65 397 aaPredicted RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 TRIM36Q9NQ86 728 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 TMEM100Q9NV29 134 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 C1orf123Q9NWV4 160 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 THUMPD1Q9NXG2 353 aaKnown RBP4.22□□□□□ -1.73
CHD4-205ENST00000536301 VAPAQ9P0L0 249 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 RNF7Q9UBF6 113 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
CHD4-205ENST00000536301 TRAV27A0A087WT01 109 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 TRAV38-1A0A0B4J264 116 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 NPIPB13A6NJU9 1138 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 NPIPB4C9JG80 1138 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 E9PQ18 207 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.21□□□□□ -1.74
CHD4-205ENST00000536301 M0QX08 132 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 ACOT8O14734 319 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
CHD4-205ENST00000536301 PF4P02776 101 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 MT-ND1P03886 318 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 IL6P05231 212 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 GRPP07492 148 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 PF4V1P10720 104 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 KITP10721 976 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 CTLA4P16410 223 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 CA6P23280 308 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 EEF1B2P24534 225 aaKnown RBP4.21□□□□□ -1.74
CHD4-205ENST00000536301 RAB13P51153 203 aa4.21□□□□□ -1.74
CHD4-205ENST00000536301 POLR2JP52435 117 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms