RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 LANCL2Q9NS86 450 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 EMC3Q9P0I2 261 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 GPN3Q9UHW5 284 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 HHLA2Q9UM44 414 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 DIDO1Q9BTC0 2240 aaKnown RBP12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 RER1O15258 196 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 SSX5O60225 188 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 DDAH2O95865 285 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 C1QL2Q7Z5L3 287 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 GPER1Q99527 375 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 G6PC2Q9NQR9 355 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 CUTCQ9NTM9 273 aa12.38□□□□□ -0.43
LPCAT3-203ENST00000535479 NCOA6Q14686 2063 aaPredicted RBP12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 TO15178 435 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 BCL2L11O43521 198 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 SYT7O43581 403 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 LDOC1O95751 146 aaPredicted RBP12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 IL33O95760 270 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 FOLR1P15328 257 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ADH6P28332 368 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 RORAP35398 523 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ARL4DP49703 201 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 EGR3Q06889 387 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 MICBQ29980 383 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 NKAPLQ5M9Q1 402 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ZNF721Q8TF20 911 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 UTP23Q9BRU9 249 aaKnown RBP12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 TAS2R8Q9NYW2 309 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 SUSD2Q9UGT4 822 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ZNF407Q9C0G0 2248 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 TRAV36DV7A0A075B6V5 113 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 EMP2P54851 167 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 GLO1Q04760 184 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 CCDC107Q8WV48 283 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 OR10C1Q96KK4 312 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 METTL8Q9H825 291 aaKnown RBP12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 KLHL13Q9P2N7 655 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 CYB5R1Q9UHQ9 305 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
LPCAT3-203ENST00000535479 ZNF814B7Z6K7 855 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 C9JQL5 133 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 PLPP3O14495 311 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 CRTAPO75718 401 aaPredicted RBP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 ZBTB25P24278 435 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 ELAVL1Q15717 326 aaKnown RBP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 GLIPR1L1Q6UWM5 242 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 KCNRGQ8N5I3 272 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 OR4K15Q8NH41 348 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 C11orf40Q8WZ69 217 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 PHYHIPQ92561 330 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 ADIPOR1Q96A54 375 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 FOXRED1Q96CU9 486 aaPredicted RBP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 CRB3Q9BUF7 120 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 CACNA1EQ15878 2313 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 SHANK1Q9Y566 2161 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 HCKP08631 526 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 SPP1P10451 314 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 PVALBP20472 110 aaPredicted RBP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 TNFRSF4P43489 277 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 SCRN3Q0VDG4 424 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 SP6Q3SY56 376 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 TSPO2Q5TGU0 170 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 FAM166AQ6J272 317 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 ARHGAP5-AS1Q96IT6 56 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 C12orf57Q99622 126 aa12.36□□□□□ -0.43
LPCAT3-203ENST00000535479 MS4A18H0YCH9 400 aa12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 AHSA1O95433 338 aa12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 UBBP0CG47 229 aa12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 UBCP0CG48 685 aaKnown RBP12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 PPICP45877 212 aa12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 DHPSP49366 369 aaPredicted RBP12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 CSNK1EP49674 416 aaKnown RBP12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 FHITP49789 147 aa12.35□□□□□ -0.43
LPCAT3-203ENST00000535479 PNLIPRP2P54317 469 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms