RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF627Q7L945 461 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 RRM2BQ7LG56 351 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 OVCH2Q7RTZ1 564 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 NKAIN4Q8IVV8 208 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 SKA3Q8IX90 412 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 CDK20Q8IZL9 346 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 C9orf62Q8N4C0 152 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 DUSP18Q8NEJ0 188 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM255BQ8WV15 326 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 SGTBQ96EQ0 304 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC25A44Q96H78 314 aaPredicted RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 TPD52L3Q96J77 140 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF583Q96ND8 569 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 FOXN4Q96NZ1 517 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 KCNK17Q96T54 332 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF224Q9NZL3 707 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 EGFL7Q9UHF1 273 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ING4Q9UNL4 249 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 CMAHPQ9Y471 501 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 U3KQ87 197 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZANQ9Y493 2812 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 IGHV4-61A0A0C4DH41 118 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 IQCMA0A1B0GVH7 501 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 LOC390937A0A1W2PQ73 354 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM129A0AVI4 362 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 PQLC2LA1A4F0 135 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 DHHO43323 396 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 PIP5K1CO60331 668 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FARS2O95363 451 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 IFNA2P01563 188 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 F13BP05160 661 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ADRA2AP08913 450 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 QDPRP09417 244 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 PGA4P0DJD7 388 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 PGA3P0DJD8 388 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 OR8G3PP0DMU2 310 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF35P13682 527 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 APEHP13798 732 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 DAOP14920 347 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FUT1P19526 365 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 RBM34P42696 430 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 HAAOP46952 286 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 RAB14P61106 215 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 IL5RAQ01344 420 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 RPL18Q07020 188 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MRPL28Q13084 256 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MAD2L1BPQ15013 274 aaPredicted RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MICAQ29983 383 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 LRFN4Q6PJG9 635 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 CORO6Q6QEF8 472 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF367Q7RTV3 350 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 OR8H2Q8N162 312 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC22A24Q8N4F4 322 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SYT14Q8NB59 555 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF680Q8NEM1 530 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 NOXO1Q8NFA2 376 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 OR2T12Q8NG77 320 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FGFBP3Q8TAT2 258 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM239Q8WW34 195 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 NEU4Q8WWR8 484 aaPredicted RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ASB10Q8WXI3 467 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MARC2Q969Z3 335 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MRPL24Q96A35 216 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 DACT3Q96B18 629 aaPredicted RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF75AQ96N20 296 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FYTTD1Q96QD9 318 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SYT3Q9BQG1 590 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF416Q9BWM5 594 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MRPL37Q9BZE1 423 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 BPESC1Q9GZL8 116 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 POLR2J2Q9GZM3 115 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SHARPINQ9H0F6 387 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 POLR2J3Q9H1A7 115 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 CHODLQ9H9P2 273 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SMURF1Q9HCE7 757 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 EMC7Q9NPA0 242 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 PCDHB16Q9NRJ7 776 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 C20orf141Q9NUB4 165 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM38BQ9NVV0 291 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 NUFIP1Q9UHK0 495 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FBXL3Q9UKT7 428 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 NDRG4Q9ULP0 352 aaKnown RBP7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 FZR1Q9UM11 496 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 KCNK7Q9Y2U2 307 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 MED31Q9Y3C7 131 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 SESN1Q9Y6P5 492 aa7.36□□□□□ -1.23
SFSWAP-202ENST00000535202 ELOVL7A1L3X0 281 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 H3BUI4 141 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 M0R233 179 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 TSPAN4O14817 238 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 MYL12BO14950 172 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 ORC5O43913 435 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 LMX1BO60663 402 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 FAM20BO75063 409 aa7.35□□□□□ -1.23
SFSWAP-202ENST00000535202 IGFBP1P08833 259 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms