RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR2V2Q96R30 315 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 TMEM106BQ9NUM4 274 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 DCAF16Q9NXF7 216 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 DNAJB9Q9UBS3 223 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF593O00488 134 aaPredicted RBP25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 POU1F1P28069 291 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 MALLQ13021 153 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 HNRNPA0Q13151 305 aaKnown RBP25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 GK2Q14410 553 aaPredicted RBP25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 TEX30Q5JUR7 227 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 CXXC5Q7LFL8 322 aaKnown RBP25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 HS3ST5Q8IZT8 346 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF283Q8N7M2 679 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 SLCO4A1Q96BD0 722 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 GAL3ST1Q99999 423 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 SLC30A2Q9BRI3 323 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF556Q9HAH1 456 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 NPTNQ9Y639 398 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 DYSFO75923 2080 aa25.59■■□□□ 1.69
SSSCA1-207ENST00000533115 ISPDA4D126 451 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 LINC01590Q5TEZ4 76 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 BHLHE23Q8NDY6 225 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 OR10AD1Q8NGE0 317 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 MED20Q9H944 212 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 PPP1R3CQ9UQK1 317 aa25.58■■□□□ 1.69
SSSCA1-207ENST00000533115 TRAV20A0A0B4J274 112 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 FAM183AA6NL82 134 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 ANXA8P13928 327 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 PRKACGP22612 351 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 OTX1P32242 354 aaPredicted RBP25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 SLC6A9P48067 706 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 GINS1Q14691 196 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 SLAMF6Q96DU3 332 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 COPS4Q9BT78 406 aa25.57■■□□□ 1.68
SSSCA1-207ENST00000533115 IGHV2-70P01814 119 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 OSMP13725 252 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 SRP14P37108 136 aaKnown RBP25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 RBMXP38159 391 aaKnown RBP25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 PRSS12P56730 875 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 DRAM2Q6UX65 266 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 OTULINQ96BN8 352 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 TMEM100Q9NV29 134 aa25.56■■□□□ 1.68
SSSCA1-207ENST00000533115 H0YL77 283 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 PHF1O43189 567 aaPredicted RBP25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 MLNRO43193 412 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 PLPP2O43688 288 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 RASSF2P50749 326 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 TAF13Q15543 124 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 PGAP1Q75T13 922 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 ZNF771Q7L3S4 317 aaPredicted RBP25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 ST7LQ8TDW4 575 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 MEGF10Q96KG7 1140 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 GCM1Q9NP62 436 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 CENPMQ9NSP4 180 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 UBAP1Q9NZ09 502 aa25.55■■□□□ 1.68
SSSCA1-207ENST00000533115 A0A1B0GWJ7 208 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 SBK2P0C263 348 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 PAICSP22234 425 aaKnown RBP25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 SRP9P49458 86 aaKnown RBP25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 SNAI3Q3KNW1 292 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 MRPL21Q7Z2W9 205 aaKnown RBP25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 SIGLEC11Q96RL6 698 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 INTS14Q96SY0 518 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 KCNJ15Q99712 375 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 NTN4Q9HB63 628 aa25.54■■□□□ 1.68
SSSCA1-207ENST00000533115 RNF212BA8MTL3 300 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 ZNF878C9JN71 531 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 ATP5HO75947 161 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 GLCEO94923 617 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 GSTT1P30711 240 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 PRKXP51817 358 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 EIF2B1Q14232 305 aaKnown RBP25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 SHQ1Q6PI26 577 aaKnown RBP25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 ERI1Q8IV48 349 aaKnown RBP25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 NRBF2Q96F24 287 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 OR51V1Q9H2C8 321 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 MARCH7Q9H992 704 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 G6PC2Q9NQR9 355 aa25.53■■□□□ 1.68
SSSCA1-207ENST00000533115 PRR23D1E9PI22 279 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 F5H5P2 479 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 IFNL4K9M1U5 179 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 TIPRLO75663 272 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 HMGN1P05114 100 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 PRR23D2P0DMB1 279 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 MMP16P51512 607 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 BTG1P62324 171 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 CDK5Q00535 292 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 FAHD2BQ6P2I3 314 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 DPY19L4Q7Z388 723 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 OR6N2Q8NGY6 317 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 SPRYD4Q8WW59 207 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 TMEM158Q8WZ71 300 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 FAHD2AQ96GK7 314 aa25.52■■□□□ 1.68
SSSCA1-207ENST00000533115 TMEM178BH3BS89 294 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 PNPP00491 289 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 HLA-DPB1P04440 258 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 ANOS1P23352 680 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 ZNF92Q03936 586 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 TMEM155Q4W5P6 130 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 PLBD1Q6P4A8 553 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms