RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SLC16A9Q7RTY1 509 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 OR5L1Q8NGL2 311 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 HRASLS5Q96KN8 279 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 MSL2Q9HCI7 577 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 CENPMQ9NSP4 180 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 ZNF319Q9P2F9 582 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 GPR160Q9UJ42 338 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
TSPAN4-220ENST00000532375 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 DYSFO75923 2080 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 LCATP04180 440 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 CD55P08174 381 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 LIPAP38571 399 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 PRSS12P56730 875 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 PCGF3Q3KNV8 242 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 ZIK1Q3SY52 487 aaPredicted RBP11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 OR2T2Q6IF00 324 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 RDH5Q92781 318 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 COPS4Q9BT78 406 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 C9orf16Q9BUW7 83 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 CYSLTR2Q9NS75 346 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 HAO2Q9NYQ3 351 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 CGGBP1Q9UFW8 167 aaPredicted RBP11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 COPS3Q9UNS2 423 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
TSPAN4-220ENST00000532375 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 SPRY3O43610 288 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 LYNP07948 512 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 ERCC1P07992 297 aaPredicted RBP11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC2A1P11166 492 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 CRYBB2P43320 205 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 RPS7P62081 194 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 GRB2P62993 217 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF92Q03936 586 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM209AQ5JX71 171 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 ZBTB49Q6ZSB9 765 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 OR8G5Q8NG78 346 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 OR8J1Q8NGP2 316 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 SPSB4Q96A44 273 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 EME1Q96AY2 570 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 PRRG3Q9BZD7 231 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 TOR3AQ9H497 397 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 ADGRL4Q9HBW9 690 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 CACNG2Q9Y698 323 aa11.83□□□□□ -0.52
TSPAN4-220ENST00000532375 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC22A31A6NKX4 558 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 MLNRO43193 412 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 TIMM8AO60220 97 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 BAG2O95816 211 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 MRPL3P09001 348 aaKnown RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 TACSTD2P09758 323 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ANPEPP15144 967 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 GABRB1P18505 474 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ACHEP22303 614 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC15A1P46059 708 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 RAD23AP54725 363 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ROM1Q03395 351 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 GLYATL3Q5SZD4 288 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 THEM6Q8WUY1 208 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 TRUB1Q8WWH5 349 aaKnown RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 SGK3Q96BR1 496 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC30A2Q9BRI3 323 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 PIMREGQ9BSJ6 248 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF275Q9NSD4 429 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 NSD1Q96L73 2696 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-220ENST00000532375 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.523e-9■■■□□ 17.3
TSPAN4-220ENST00000532375 H0YL77 283 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 CDC14BO60729 498 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 MT-ND5P03915 603 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 HEXAP06865 529 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 SBK2P0C263 348 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 HTR1FP30939 366 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 RBMXP38159 391 aaKnown RBP11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC6A9P48067 706 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 CX3CR1P49238 355 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 TMEM33P57088 247 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF121P58317 390 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 SNRPGP62308 76 aaKnown RBP11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 TAF13Q15543 124 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms