RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PPP3R2Q96LZ3 170 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TNFRSF13CQ96RJ3 184 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 IL4I1Q96RQ9 567 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 RNF2Q99496 336 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PHB2Q99623 299 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HOPXQ9BPY8 73 aaPredicted RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ECSITQ9BQ95 431 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DUSP16Q9BY84 665 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 HES7Q9BYE0 225 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 RAB34Q9BZG1 259 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TLNRD1Q9H1K6 362 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 PPA2Q9H2U2 334 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 C1orf198Q9H425 327 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DHX35Q9H5Z1 703 aaKnown RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 CLMPQ9H6B4 373 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 KAT8Q9H7Z6 458 aaKnown RBP2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DCLRE1BQ9H816 532 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 C3orf14Q9HBI5 128 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 POPDC2Q9HBU9 364 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 TMBIM4Q9HC24 238 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 S100A14Q9HCY8 104 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 DDIT4Q9NX09 232 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 GSKIPQ9P0R6 139 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SAR1BQ9Y6B6 198 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 USP47Q96K76 1375 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 FER1L5A0AVI2 2057 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 A2MP01023 1474 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 SPATA31D1Q6ZQQ2 1576 aa2.7□□□□□ -1.98
PTPRK-220ENST00000531466 ATP10DQ9P241 1426 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TRAV8-7A0A075B6U6 113 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 A0A1B0GVI7 797 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SMIM31A0A1B0GVY4 71 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SH3PXD2BA1X283 911 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DISC1C4P0D8 188 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 E5RGE8 158 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 H0Y980 276 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SULT1C2O00338 296 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DCTN6O00399 190 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 IMPA2O14732 288 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 PHYHO14832 338 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TPST1O60507 370 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CCDC22O60826 627 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ADAP1O75689 374 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 UGT2B17O75795 530 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR2B3O76000 313 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SCELO95171 688 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CLDN9O95484 217 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 GOT2P00505 430 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 PCCAP05165 728 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 C1GALT1C1LP0DN25 315 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ATP1B2P14415 290 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CPN1P15169 458 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CYP11B1P15538 503 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 H2AFXP16104 143 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NCK1P16333 377 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NPR2P20594 1047 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TBXA2RP21731 343 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 FCARP24071 287 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 F2RP25116 425 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ELK4P28324 431 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 PRDX3P30048 256 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 GPX4P36969 197 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 RBM34P42696 430 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 UGT2B15P54855 530 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM33P57088 247 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR2B8PP59922 312 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ERVPABLB-1P60509 514 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NUTF2P61970 127 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 BTN3A2P78410 334 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 GRB7Q14451 532 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 IRF4Q15306 451 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ZBTB6Q15916 424 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TNXAQ16473 311 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DUSP7Q16829 419 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF658BQ4V348 819 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SFT2D3Q587I9 215 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF542PQ5EBM4 170 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 VWA2Q5GFL6 755 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SAMD4BQ5PRF9 694 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 RBM48Q5RL73 367 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DNLZQ5SXM8 178 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TPRG1LQ5T0D9 272 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 PLPP4Q5VZY2 271 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 C22orf42Q6IC83 251 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SLC27A4Q6P1M0 643 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DHRS4L2Q6PKH6 230 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SIGLEC15Q6ZMC9 328 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 DPY19L2P2Q6ZN68 376 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 GDPD3Q7L5L3 318 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM144Q7Z5S9 345 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 APRG1Q8IVJ8 170 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 C10orf107Q8IVU9 208 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 Q8N9G6 341 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CDRT4Q8N9R6 151 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR2M7Q8NG81 312 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR52H1Q8NGJ2 320 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR4K15Q8NH41 348 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 OR10A6Q8NH74 314 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF564Q8TBZ8 553 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 BLOC1S5Q8TDH9 187 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms