RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 YLPM1P49750 1951 aaKnown RBP10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 M0R129 80 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 HEXAP06865 529 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 LYNP07948 512 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 CD55P08174 381 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 USF1P22415 310 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 OPRL1P41146 370 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 NAA10P41227 235 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 CRYBB2P43320 205 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 SLC6A9P48067 706 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 PRKXP51817 358 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 MALLQ13021 153 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 ZMAT1Q5H9K5 638 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 FAM209AQ5JX71 171 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 LCN1P1Q5VSP4 162 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 NXNL2Q5VZ03 156 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 OR2T2Q6IF00 324 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 Q6ZR03 302 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 BCDIN3DQ7Z5W3 292 aaKnown RBP10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 THEM6Q8WUY1 208 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 STMN2Q93045 179 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 YIPF5Q969M3 257 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 IL4I1Q96RQ9 567 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 C9orf16Q9BUW7 83 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 YIPF3Q9GZM5 350 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 DECR2Q9NUI1 292 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 H2AFY2Q9P0M6 372 aaPredicted RBP10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 ORC6Q9Y5N6 252 aa10.78□□□□□ -0.68
CCDC90B-216ENST00000529856 IQCF6A8MYZ5 107 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 E9PQ18 207 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 TPD52L2O43399 206 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 RP2O75695 350 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 BAG2O95816 211 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 SELEP16581 610 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 ALOX5APP20292 161 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 ACHEP22303 614 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 HCCSP53701 268 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 RAD23AP54725 363 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 TMEM33P57088 247 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 GABPB1Q06547 395 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 GGTLC2Q14390 218 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 GK2Q14410 553 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 SNAI3Q3KNW1 292 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 OR5AS1Q8N127 324 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 OR8G5Q8NG78 346 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 HRASLS5Q96KN8 279 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 ZNF582Q96NG8 517 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 SLC29A1Q99808 456 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 EGLN1Q9GZT9 426 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 SAP30LQ9HAJ7 183 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 MTORP42345 2549 aa10.77□□□□□ -0.69
CCDC90B-216ENST00000529856 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 IGHV1-69-2A0A0G2JMI3 117 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 C5orf63A6NC05 138 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 SLC22A31A6NKX4 558 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 CDC14BO60729 498 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 APOC1P02654 83 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 MRPL3P09001 348 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 TACSTD2P09758 323 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 H2BFMP0C1H6 154 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 SLC2A1P11166 492 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 ANOS1P23352 680 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 HSD11B1P28845 292 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 CX3CR1P49238 355 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 CDC42P60953 191 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 TNFAIP6P98066 277 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 ZNF92Q03936 586 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 TMEM249Q2WGJ8 235 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 ZIK1Q3SY52 487 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 ZBTB49Q6ZSB9 765 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 USP51Q70EK9 711 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 Q71RC1 249 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 PGAP1Q75T13 922 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 PRSS45Q7RTY3 260 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 GID4Q8IVV7 300 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 OR8J1Q8NGP2 316 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 OR13G1Q8NGZ3 307 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 TRUB1Q8WWH5 349 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 SP140LQ9H930 580 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 ZNF275Q9NSD4 429 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 HAO2Q9NYQ3 351 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 LAMP5Q9UJQ1 280 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 KLHDC2Q9Y2U9 406 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 CSPG4Q6UVK1 2322 aa10.76□□□□□ -0.69
CCDC90B-216ENST00000529856 A0A1B0GWJ7 208 aa10.75□□□□□ -0.69
CCDC90B-216ENST00000529856 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
CCDC90B-216ENST00000529856 XRCC2O43543 280 aa10.75□□□□□ -0.69
CCDC90B-216ENST00000529856 LILRA1O75019 489 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms