RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SETD7Q8WTS6 366 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 RORBQ92753 470 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 CDS1Q92903 461 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.49□□□□□ -1.69
PCF11-202ENST00000528336 APH1AQ96BI3 265 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 CXorf40BQ96DE9 158 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 FAHD2AQ96GK7 314 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 C1orf147Q96MC9 270 aaPredicted RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 OR4F4Q96R69 305 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 OR51B6Q9H340 312 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PIGUQ9H490 435 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 GLIPR2Q9H4G4 154 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 NT5DC2Q9H857 520 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PATZ1Q9HBE1 687 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 MRPL40Q9NQ50 206 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 SAMSN1Q9NSI8 373 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 SPATA2Q9UM82 520 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 YARS2Q9Y2Z4 477 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 A0A087WWV3 80 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 NPIPA5A0A0B4J1W7 369 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 SAGE2PA6NJ88 616 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 NPIPA5E9PKD4 350 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 PGRMC1O00264 195 aaKnown RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 SGCEO43556 437 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 PSIP1O75475 530 aaKnown RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 CSNK1A1P48729 337 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 RGS6P49758 472 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 CRISP1P54107 249 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 ERVS71-1P61550 626 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 MRPS22P82650 360 aaKnown RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 KCTD19Q17RG1 926 aaPredicted RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 SOHLH1Q5JUK2 328 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 OR5M10Q6IEU7 315 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 APTXQ7Z2E3 356 aaKnown RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 SETD3Q86TU7 594 aaPredicted RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 OR2L13Q8N349 312 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 LINC00612Q8N6U2 182 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 SAMD12Q8N8I0 201 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 OR8K1Q8NGG5 319 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 RHOXF1Q8NHV9 184 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 LYPD6BQ8NI32 183 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 ITLN1Q8WWA0 313 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 SLC35B4Q969S0 331 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 ZBED6CLQ96FA7 236 aaPredicted RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 SDSLQ96GA7 329 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 MBOAT7Q96N66 472 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 ZNF670Q9BS34 389 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 TIMM29Q9BSF4 260 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 ZYG11BQ9C0D3 744 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 NHEJ1Q9H9Q4 299 aaPredicted RBP4.48□□□□□ -1.69
PCF11-202ENST00000528336 C8orf4Q9NR00 106 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 SLC7A10Q9NS82 523 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 TAS2R9Q9NYW1 312 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 PDE10AQ9Y233 779 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 OARD1Q9Y530 152 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 GMPPBQ9Y5P6 360 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 HTTP42858 3142 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 PARP14Q460N5 1801 aa4.48□□□□□ -1.69
PCF11-202ENST00000528336 A0A0J9YVX5 310 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 E5RI56 91 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 E9PAM4 449 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 RGS16O15492 202 aaPredicted RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 CTDNEP1O95476 244 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 RAB3DO95716 219 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 TIMP1P01033 207 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 GIMD1P0DJR0 217 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 HLA-GP17693 338 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 FOXN2P32314 431 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 DNASE1L1P49184 302 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 XKP51811 444 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 CXCR4P61073 352 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 SCRN3Q0VDG4 424 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 TIGITQ495A1 244 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 COX19Q49B96 90 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 NHLRC3Q5JS37 347 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 TIMM23BQ5SRD1 257 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 THOC7Q6I9Y2 204 aaKnown RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 ARMCX5Q6P1M9 558 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 FAHD1Q6P587 224 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 STAC2Q6ZMT1 411 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 ASCL5Q7RTU5 278 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 HIPK1Q86Z02 1210 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 ZSCAN4Q8NAM6 433 aaPredicted RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 TYMSOSQ8TAI1 123 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 PHF10Q8WUB8 498 aaKnown RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 CCDC126Q96EE4 140 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 ZNF75AQ96N20 296 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 MCCC1Q96RQ3 725 aaPredicted RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 FGF20Q9NP95 211 aaPredicted RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 C1orf109Q9NX04 203 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 B4GALT7Q9UBV7 327 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 WARS2Q9UGM6 360 aaKnown RBP4.47□□□□□ -1.69
PCF11-202ENST00000528336 C3orf18Q9UK00 162 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
PCF11-202ENST00000528336 ZNF236Q9UL36 1845 aa4.46□□□□□ -1.69
PCF11-202ENST00000528336 IGHV2-70DA0A0C4DH43 119 aa4.46□□□□□ -1.7
PCF11-202ENST00000528336 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms