RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CLDN16Q9Y5I7 305 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CSAG2Q9Y5P2 127 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 KIR2DS5A0A0G2JLQ3 304 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 A0A0G2JNG1 304 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM269A0A1B0GVZ9 245 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CPED1A4D0V7 1026 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 KIR2DS3K7RE56 304 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 P2RY10O00398 339 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 GP1BBP13224 206 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 PSMB6P28072 239 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 KIR2DS5Q14953 304 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 PRTGQ2VWP7 1150 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 H3F3CQ6NXT2 135 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM151BQ8IW70 566 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM105Q8N8V8 129 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 OR4K17Q8NGC6 315 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 OR5AP2Q8NGF4 316 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 MITD1Q8WV92 249 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 TMED6Q8WW62 240 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
CAPN1-208ENST00000527323 GDF2Q9UK05 429 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-208ENST00000527323 BCAT2O15382 392 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TPT1P13693 172 aaKnown RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 CD27P26842 260 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 IL12BP29460 328 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 SERPINF1P36955 418 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR1D5P58170 312 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 IGLV3-21P80748 117 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 GLO1Q04760 184 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 RAB11FIP2Q7L804 512 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 PRSS58Q8IYP2 241 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 FGGYQ96C11 551 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 C8orf44Q96CB5 159 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 C12orf57Q99622 126 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 MAP3K3Q99759 626 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TWSG1Q9GZX9 223 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 LAT2Q9GZY6 243 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 ADAM19Q9H013 955 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 FBRSQ9HAH7 460 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR52A1Q9UKL2 312 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 ATXN7L1Q9ULK2 861 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 A0A0A6YYH2 397 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 A6NJ64 397 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR5K4A6NMS3 321 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TTLL8A6PVC2 850 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 PMP2P02689 132 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 IGFBP3P17936 291 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 PPICP45877 212 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 SLC6A8P48029 635 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 HSD17B7P56937 341 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 ZXDAP98168 799 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 ROM1Q03395 351 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 NKAPLQ5M9Q1 402 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR52N5Q8NH56 324 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TBL1XR1Q9BZK7 514 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR2S2Q9NQN1 319 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 SOHLH2Q9NX45 425 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 OR6C76A6NM76 312 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 NSA2O95478 260 aaKnown RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 GNB3P16520 340 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 RORAP35398 523 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 SRSF4Q08170 494 aaKnown RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 SERTAD2Q14140 314 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 DCXRQ7Z4W1 244 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 GPBAR1Q8TDU6 330 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 CPNE2Q96FN4 548 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 CNTD2Q9H8S5 307 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 R4GMQ9 66 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 R4GN57 208 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
CAPN1-208ENST00000527323 IGLV1-36A0A0B4J1U3 117 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 WISP1O95388 367 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ACTL6AO96019 429 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 YPEL5P62699 121 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF260Q3ZCT1 412 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 PLEKHN1Q494U1 663 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-208ENST00000527323 BAP18Q8IXM2 172 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZDHHC22Q8N966 263 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF248Q8NDW4 579 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 OR10R2Q8NGX6 335 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 MARCH1Q8TCQ1 289 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ELP5Q8TE02 316 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 RNF141Q8WVD5 230 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 OR11A1Q9GZK7 315 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 TLNRD1Q9H1K6 362 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF107Q9UII5 783 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms