RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PMF1-BGLAPU3KQ54 211 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 A0A087WXM4 84 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 H7C417 338 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 CLIC3O95833 236 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 LCATP04180 440 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 MPV17P39210 176 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 MTNR1AP48039 350 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 PTH2RP49190 550 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 PRKXP51817 358 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 CDH15P55291 814 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SELENOVP59797 346 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 IL18R1Q13478 541 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 DRAM2Q6UX65 266 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 LRRC75A-AS1Q8N1F1 130 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 OR5L1Q8NGL2 311 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 MYEF2Q9P2K5 600 aaKnown RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 FBXO9Q9UK97 447 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 COPS3Q9UNS2 423 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 PRRC2AP48634 2157 aaKnown RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 WBP4O75554 376 aaKnown RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 IGHV3-13P01766 116 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 APOC1P02654 83 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 H2BFMP0C1H6 154 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 OR2T7P0C7T2 308 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 HSD11B1P28845 292 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 GCH1P30793 250 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 SLC6A9P48067 706 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 PPOXP50336 477 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 ISL1P61371 349 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 IL5RAQ01344 420 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 ROM1Q03395 351 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 MAD2L1BPQ15013 274 aaPredicted RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 TMEM255AQ5JRV8 349 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 LRRN1Q6UXK5 716 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 RFLNBQ8N5W9 214 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 SETD9Q8NE22 299 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 OR2T27Q8NH04 317 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 TRMT61AQ96FX7 289 aaKnown RBP11.08□□□□□ -0.64
SMPD1-202ENST00000526280 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 SLCO1C1Q9NYB5 712 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 TAAR3PQ9P1P4 343 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 ITGB1BP2Q9UKP3 347 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 HSPE1-MOB4S4R3N1 261 aa11.08□□□□□ -0.64
SMPD1-202ENST00000526280 A0A1W2PPW3 197 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 A0A1W2PQL4 384 aaPredicted RBP11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PRR32B1ATL7 298 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF670-ZNF695F2Z2N8 137 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 J3QRE1 110 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PHYHO14832 338 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF254O75437 659 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 APOL3O95236 402 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 CX3CR1P49238 355 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ART1P52961 327 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ATP5J2P56134 94 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 CXCR4P61073 352 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PSG7Q13046 419 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 MOGQ16653 247 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF322Q6U7Q0 402 aaPredicted RBP11.07□□□□□ -0.64
SMPD1-202ENST00000526280 FBXW12Q6X9E4 464 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PRSS45Q7RTY3 260 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 KRT77Q7Z794 578 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF283Q8N7M2 679 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 HAVCR1Q96D42 359 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 CMBLQ96DG6 245 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PERPQ96FX8 193 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 MROQ9BYG7 248 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 RBM38Q9H0Z9 239 aaKnown RBP11.07□□□□□ -0.64
SMPD1-202ENST00000526280 NIPAL2Q9H841 368 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 EXOGQ9Y2C4 368 aaKnown RBP11.07□□□□□ -0.64
SMPD1-202ENST00000526280 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 OTOGQ6ZRI0 2925 aa11.07□□□□□ -0.64
SMPD1-202ENST00000526280 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 C5orf63A6NC05 138 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 M0R233 179 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 PSMD9O00233 223 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 NDUFS7O75251 213 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ADRA2AP08913 450 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 SLC2A1P11166 492 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 DBTP11182 482 aaKnown RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 RAC2P15153 192 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 KITLGP21583 273 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ANOS1P23352 680 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ALDH3B1P43353 468 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF91Q05481 1191 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms