RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 MBOAT2Q6ZWT7 520 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 RRM2BQ7LG56 351 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ZER1Q7Z7L7 766 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 LRRC75AQ8NAA5 344 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 OR13C2Q8NGS9 318 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 OR2T29Q8NH02 315 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 LIPHQ8WWY8 451 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ACOT11Q8WXI4 607 aaPredicted RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 STMN2Q93045 179 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 PTP4A1Q93096 173 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 UBE2FQ969M7 185 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 MEGF10Q96KG7 1140 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 Q96M85 177 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 SEPHS2Q99611 448 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 NDEL1Q9GZM8 345 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 REEP1Q9H902 201 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 POLE4Q9NR33 117 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 MAN2C1Q9NTJ4 1040 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 C1RLQ9NZP8 487 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 DNAJB11Q9UBS4 358 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 IL19Q9UHD0 177 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ENOPH1Q9UHY7 261 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 COA3Q9Y2R0 106 aaPredicted RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 ADAM18Q9Y3Q7 739 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 TGP01266 2768 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 A0A0G2JK05 382 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 A0A1W2PRD5 423 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 A0A1W2PRF3 423 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 A0A1W2PRM7 423 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 CLPSL1A2RUU4 121 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 EFCAB9A8MZ26 197 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 CENPBD1B2RD01 187 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 TNFRSF11BO00300 401 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 GNGT2O14610 69 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 FFAR1O14842 300 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 RER1O15258 196 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 SLC16A7O60669 478 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 PLATP00750 562 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 KITLGP21583 273 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 PITPNBP48739 271 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 ARF6P62330 175 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 SPIBQ01892 262 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 PRKCDQ05655 676 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 COX10Q12887 443 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 ATP6AP1Q15904 470 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 MEP1BQ16820 701 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 CCDC92Q53HC0 331 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 ZMAT1Q5H9K5 638 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 PRAMEF6Q5VXH4 476 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 WDR25Q64LD2 544 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 ASPHD2Q6ICH7 369 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 CORO6Q6QEF8 472 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 ZNF730Q6ZMV8 503 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 RHOUQ7L0Q8 258 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 VASH1Q7L8A9 365 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 HDDC2Q7Z4H3 204 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 TSEN54Q7Z6J9 526 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 OAFQ86UD1 273 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 NAA40Q86UY6 237 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 NRMQ8IXM6 262 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 C1orf174Q8IYL3 243 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 FAM86B1Q8N7N1 296 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 OR8G5Q8NG78 346 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 OR8B3Q8NGG8 313 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 OR4F5Q8NH21 305 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 SLC7A13Q8TCU3 470 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 WFDC12Q8WWY7 111 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 UPRTQ96BW1 309 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 RASD2Q96D21 266 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 BPIFA2Q96DR5 249 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 NEIL1Q96FI4 390 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 CENPNQ96H22 339 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 PLEKHA8Q96JA3 519 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 ZNF582Q96NG8 517 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 TECTBQ96PL2 329 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 OR8B2Q96RD0 313 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 RBM4BQ9BQ04 359 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 ALG12Q9BV10 488 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 ZMAT3Q9HA38 289 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 SMURF2Q9HAU4 748 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 S100A14Q9HCY8 104 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 C8orf4Q9NR00 106 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 TBCCD1Q9NVR7 557 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 STX18Q9P2W9 335 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 GRHPRQ9UBQ7 328 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 CLN8Q9UBY8 286 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 MIOXQ9UGB7 285 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 IL20RAQ9UHF4 553 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 NDRG4Q9ULP0 352 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 POLR3KQ9Y2Y1 108 aaPredicted RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 SAMHD1Q9Y3Z3 626 aaKnown RBP5.48□□□□□ -1.53
CD44-221ENST00000526000 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 N6AMT1Q9Y5N5 214 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 LYVE1Q9Y5Y7 322 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 V9GYQ6 96 aa5.48□□□□□ -1.53
CD44-221ENST00000526000 A0A087WUU8 490 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CENPVL3A0A0U1RRI6 287 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 NPIPB13A6NJU9 1138 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 A8MXK9 166 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 SRRM5B3KS81 715 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms