RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 MEDAGQ5VYS4 303 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF786Q8N393 782 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 C10orf105Q8TEF2 133 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ASB17Q8WXJ9 295 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 FAM168AQ92567 244 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 CMBLQ96DG6 245 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 C18orf12Q96KH6 178 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-202ENST00000524475 AMELYQ99218 206 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 RHNO1Q9BSD3 238 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 OPA3Q9H6K4 179 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ADGRL4Q9HBW9 690 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-202ENST00000524475 LAMP5Q9UJQ1 280 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 ZDHHC8Q9ULC8 765 aa12.89□□□□□ -0.35
SF3B2-202ENST00000524475 LOC100130705A0A1B0GUX0 176 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 IQCF6A8MYZ5 107 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 DLGAP1O14490 977 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF254O75437 659 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 CD55P08174 381 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 SBK2P0C263 348 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 NAT2P11245 290 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 DAOP14920 347 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 GIFP27352 417 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 HSD11B1P28845 292 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 SLC6A9P48067 706 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 CDK5R2Q13319 367 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 GK2Q14410 553 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 OCLNQ16625 522 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 PRSS45Q7RTY3 260 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 NAA40Q86UY6 237 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 LURAP1LQ8IV03 231 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 UBASH3BQ8TF42 649 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 SPSB4Q96A44 273 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 TPK1Q9H3S4 243 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 CLN6Q9NWW5 311 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.88□□□□□ -0.35
SF3B2-202ENST00000524475 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 GMPPBQ9Y5P6 360 aa12.88□□□□□ -0.35
SF3B2-202ENST00000524475 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 A0A096LNT2 108 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 TRIM64A6NGJ6 449 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 VWC2LB2RUY7 222 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 XRCC2O43543 280 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 GABRB1P18505 474 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ACHEP22303 614 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 CX3CR1P49238 355 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 PRKXP51817 358 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 PSMA6P60900 246 aaKnown RBP12.87□□□□□ -0.35
SF3B2-202ENST00000524475 SNAI3Q3KNW1 292 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 OGFRL1Q5TC84 451 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF679Q8IYX0 411 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF283Q8N7M2 679 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 THEM6Q8WUY1 208 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
SF3B2-202ENST00000524475 FAM118AQ9NWS6 357 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 PTTG3PQ9NZH4 202 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 TLN2Q9Y4G6 2542 aa12.87□□□□□ -0.35
SF3B2-202ENST00000524475 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 H7C1Q1 480 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 NCR1O76036 304 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 LY6HO94772 140 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 IGHV1-46P01743 117 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 HPXP02790 462 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
SF3B2-202ENST00000524475 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 CFL1P23528 166 aaKnown RBP12.86□□□□□ -0.35
SF3B2-202ENST00000524475 PEX2P28328 305 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 EGR3Q06889 387 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 RIN1Q13671 783 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 HLXQ14774 488 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-202ENST00000524475 ALKBH6Q3KRA9 238 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-202ENST00000524475 OR8G5Q8NG78 346 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 OR2T27Q8NH04 317 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 RHOXF1Q8NHV9 184 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 RDH5Q92781 318 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 OR8B4Q96RC9 309 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 PIMREGQ9BSJ6 248 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 MROQ9BYG7 248 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
SF3B2-202ENST00000524475 RGCCQ9H4X1 137 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms