RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 A0A1W2PRQ8 180 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 C5orf63A6NC05 138 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 LRRC30A6NM36 301 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 IFNL4K9M1U5 179 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 RENP00797 406 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 SFTPBP07988 381 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 IRF2P14316 349 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 HIST1H1CP16403 213 aaKnown RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 CA6P23280 308 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 CRABP1P29762 137 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 MDH1P40925 334 aaKnown RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 PSME3P61289 254 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 SPIBQ01892 262 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 DGCR6Q14129 220 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 SLC35F1Q5T1Q4 408 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 GLYATQ6IB77 296 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 C8orf82Q6P1X6 216 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 LNX2Q8N448 690 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 FITM2Q8N6M3 262 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 HOPXQ9BPY8 73 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 IFT27Q9BW83 186 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
MRPS28-209ENST00000522987 RASSF4Q9H2L5 321 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 OR52D1Q9H346 318 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 EFCAB1Q9HAE3 211 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
MRPS28-209ENST00000522987 KIR2DS1A0A191URI9 304 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 TXNDC12O95881 172 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 RHCEP18577 417 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 PYCR1P32322 319 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 POU4F2Q12837 409 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 COX10Q12887 443 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 TRAP1Q12931 704 aaKnown RBP12.84□□□□□ -0.35
MRPS28-209ENST00000522987 KRT72Q14CN4 511 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 OR8G1Q15617 311 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 CLEC12AQ5QGZ9 265 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 FIP1L1Q6UN15 594 aaKnown RBP12.84□□□□□ -0.35
MRPS28-209ENST00000522987 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 MRPL21Q7Z2W9 205 aaKnown RBP12.84□□□□□ -0.35
MRPS28-209ENST00000522987 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 OR2AJ1Q8NGZ0 328 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 OR2AE1Q8NHA4 323 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
MRPS28-209ENST00000522987 C7orf34Q96L11 122 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 ATF6BQ99941 703 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 ATPIF1Q9UII2 106 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
MRPS28-209ENST00000522987 OR6C68A6NDL8 312 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 J3QW42 95 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 SLC22A2O15244 555 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 NOS3P29474 1203 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 SLC6A6P31641 620 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 MSX2P35548 267 aaPredicted RBP12.83□□□□□ -0.36
MRPS28-209ENST00000522987 OR8B8Q15620 311 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 MIDNQ504T8 468 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 GPR157Q5UAW9 335 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 DCDC5Q6ZRR9 648 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 COLCA1Q6ZS62 124 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 PDZD9Q8IXQ8 264 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 KRCC1Q9NPI7 259 aaPredicted RBP12.83□□□□□ -0.36
MRPS28-209ENST00000522987 TGP01266 2768 aa12.83□□□□□ -0.36
MRPS28-209ENST00000522987 CLDN34H7C241 214 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 GADD45GO95257 159 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 KNG1P01042 644 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 PSKH1P11801 424 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 GGT2P36268 569 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 MALLQ13021 153 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF181Q2M3W8 571 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 RFX4Q33E94 735 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 SNAI3Q3KNW1 292 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 PGM2L1Q6PCE3 622 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 FGFRL1Q8N441 504 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 CYB561A3Q8NBI2 242 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 OR51L1Q8NGJ5 315 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 MAP6Q96JE9 813 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 FUZQ9BT04 418 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 ADAT1Q9BUB4 502 aaKnown RBP12.82□□□□□ -0.36
MRPS28-209ENST00000522987 CHIAQ9BZP6 476 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 SMURF1Q9HCE7 757 aa12.82□□□□□ -0.36
MRPS28-209ENST00000522987 PNRC2Q9NPJ4 139 aaKnown RBP12.82□□□□□ -0.36
MRPS28-209ENST00000522987 DCAF13Q9NV06 445 aaKnown RBP12.82□□□□□ -0.36
MRPS28-209ENST00000522987 MRPL22Q9NWU5 206 aaKnown RBP12.82□□□□□ -0.36
MRPS28-209ENST00000522987 IGHV3OR15-7A0A075B7D8 119 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms