RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FGFBP3Q8TAT2 258 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ADAMTS15Q8TE58 950 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 RASSF5Q8WWW0 418 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 CCL17Q92583 94 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PHF21AQ96BD5 680 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 RSRC1Q96IZ7 334 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF350Q9GZX5 532 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 EVA1AQ9H8M9 152 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 MTHFD2LQ9H903 347 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 PATZ1Q9HBE1 687 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 POLE3Q9NRF9 147 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 RLIMQ9NVW2 624 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 CALML5Q9NZT1 146 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 DNAJB9Q9UBS3 223 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF346Q9UL40 294 aaKnown RBP5.5□□□□□ -1.53
SDCBP-210ENST00000522843 SLC45A2Q9UMX9 530 aa5.5□□□□□ -1.53
SDCBP-210ENST00000522843 TRGV11A0A075B6L2 103 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ISPDA4D126 451 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF99A8MXY4 864 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 DENRO43583 198 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 GPR137BO60478 399 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 SERPINB7O75635 380 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 BAG2O95816 211 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 SERPINA1P01009 418 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 IGHV1-46P01743 117 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 PPIAL4GP0DN37 164 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 THRBP10828 461 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF250P15622 560 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 MALP21145 153 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 CAPZA2P47755 286 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 POLR2HP52434 150 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 RPS23P62266 143 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 KCNJ10P78508 379 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 GLO1Q04760 184 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 FUT5Q11128 374 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 GSG1Q2KHT4 349 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 HFEQ30201 348 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 PCGF3Q3KNV8 242 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 CYBRD1Q53TN4 286 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 FAM205BPQ63HN1 556 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TYW3Q6IPR3 259 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM154Q6P9G4 183 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF620Q6ZNG0 422 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TSEN54Q7Z6J9 526 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 CLEC4FQ8N1N0 589 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM86BQ8N661 226 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZSCAN4Q8NAM6 433 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 BBS10Q8TAM1 723 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ST7LQ8TDW4 575 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 LZICQ8WZA0 190 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 CNOT9Q92600 299 aaKnown RBP5.49□□□□□ -1.53
SDCBP-210ENST00000522843 SLC35B4Q969S0 331 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 FAM162AQ96A26 154 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TAMM41Q96BW9 452 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 DDIT4LQ96D03 193 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TIMD4Q96H15 378 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF347Q96SE7 839 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF607Q96SK3 696 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 OR51I1Q9H343 314 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 C16orf95Q9H693 158 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 SAP30LQ9HAJ7 183 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 NOX4Q9NPH5 578 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 EXD2Q9NVH0 621 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ADPRHL2Q9NX46 363 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 B3GAT1Q9P2W7 334 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 P2RX2Q9UBL9 471 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 BAG5Q9UL15 447 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 RCE1Q9Y256 329 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 ANGPT4Q9Y264 503 aa5.49□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM247A6NEH6 219 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 AGAP5A6NIR3 686 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CGB1A6NKQ9 187 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 FTCDNL1E5RQL4 147 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CHRM4P08173 479 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SBK2P0C263 348 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 PATE4P0C8F1 98 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 OR8G3PP0DMU2 310 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 OR12D1P0DN82 309 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CD79AP11912 226 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CCL2P13500 99 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 ACADSP16219 412 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 RPS4Y1P22090 263 aaKnown RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 TNFSF4P23510 183 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 MMP15P51511 669 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CRISP3P54108 245 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CLDN17P56750 224 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 KLF3P57682 345 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 BLMHQ13867 455 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 CD300EQ496F6 205 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 ATAD3BQ5T9A4 648 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM225Q6GV28 225 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 RGS7BPQ6MZT1 257 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF774Q6NX45 483 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 DHRS4L2Q6PKH6 230 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM123Q8N131 208 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 OR5AK3PQ8NH89 298 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 NFKBIDQ8NI38 313 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms