RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 NUP37Q8NFH4 326 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 OR52H1Q8NGJ2 320 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 RNF166Q96A37 237 aaPredicted RBP15.36■□□□□ 0.05
SDC2-205ENST00000520233 COG8Q96MW5 612 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 HS3ST6Q96QI5 342 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 TMEM204Q9BSN7 226 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 BCL2L14Q9BZR8 327 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 BRD7Q9NPI1 651 aa15.36■□□□□ 0.05
SDC2-205ENST00000520233 PLEKHB1Q9UF11 243 aaPredicted RBP15.36■□□□□ 0.05
SDC2-205ENST00000520233 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
SDC2-205ENST00000520233 E9PI62 339 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 FAM157BP0CG42 384 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 TUBG1P23258 451 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 TGM4P49221 684 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 NKX6-1P78426 367 aaPredicted RBP15.35■□□□□ 0.05
SDC2-205ENST00000520233 ACSM1Q08AH1 577 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 SPHARQ15513 63 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 CCDC58Q4VC31 144 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 ADAM5Q6NVV9 412 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 ZNF544Q6NX49 715 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 RFPL4BQ6ZWI9 263 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 FAM57BQ71RH2 274 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 CATSPERDQ86XM0 798 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 OR5L1Q8NGL2 311 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 ABHD4Q8TB40 342 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 PGAM5Q96HS1 289 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 OR5M11Q96RB7 305 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 PBOV1Q9GZY1 135 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 ACOT13Q9NPJ3 140 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 TRIM36Q9NQ86 728 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 G6PC2Q9NQR9 355 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 TUBG2Q9NRH3 451 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 OR52A1Q9UKL2 312 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 STARD10Q9Y365 291 aa15.35■□□□□ 0.05
SDC2-205ENST00000520233 FAM221AA4D161 298 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 MAGEA13PA6NCF6 341 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 TBX1O43435 398 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 LALBAP00709 142 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 PCMT1P22061 227 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 GLRXP35754 106 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 CCR9P51686 369 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 TAS2R43P59537 309 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 PPP1CBP62140 327 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 BDH1Q02338 343 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 SNTB2Q13425 540 aaKnown RBP15.34■□□□□ 0.05
SDC2-205ENST00000520233 MED22Q15528 200 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 SNAI3Q3KNW1 292 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 BCL2L15Q5TBC7 163 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 ELMOD2Q8IZ81 293 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 KBTBD8Q8NFY9 601 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 OR1J1Q8NGS3 322 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 OR2G2Q8NGZ5 317 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 OR10A2Q9H208 303 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 OR51B6Q9H340 312 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 FRRS1LQ9P0K9 344 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 POU2F3Q9UKI9 436 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 N6AMT1Q9Y5N5 214 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 ATP23Q9Y6H3 246 aa15.34■□□□□ 0.05
SDC2-205ENST00000520233 C5orf63A6NC05 138 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 TRIM64CA6NLI5 447 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 XRCC2O43543 280 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 PLAUP00749 431 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 LCKP06239 509 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 ANOS1P23352 680 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 GTF2A1P52655 376 aaPredicted RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 NANOS3P60323 173 aaKnown RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 RPS23P62266 143 aaKnown RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 MALLQ13021 153 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 ALKBH1Q13686 389 aaKnown RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 WDR38Q5JTN6 314 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 XAF1Q6GPH4 301 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 RPL22L1Q6P5R6 122 aaKnown RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 ZNF704Q6ZNC4 412 aaPredicted RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 ZNF367Q7RTV3 350 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 PRSS35Q8N3Z0 413 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 OR8B12Q8NGG6 310 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 FCGR1BQ92637 280 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 ISYNA1Q9NPH2 558 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 ZNF319Q9P2F9 582 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 ST6GALNAC2Q9UJ37 374 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 SLC22A13Q9Y226 551 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 MYO18BQ8IUG5 2567 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 USP9XQ93008 2570 aaPredicted RBP15.33■□□□□ 0.04
SDC2-205ENST00000520233 PRR14LQ5THK1 2151 aa15.33■□□□□ 0.04
SDC2-205ENST00000520233 GCN1Q92616 2671 aaKnown RBP15.32■□□□□ 0.04
SDC2-205ENST00000520233 A0A0U1RQV5 110 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 OGG1O15527 345 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 TTRP02766 147 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 COL8A1P27658 744 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 KIR3DL2P43630 455 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 ERVS71-1P61550 626 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 DOC2BQ14184 412 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 GLYATL3Q5SZD4 288 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 UBE2UQ5VVX9 321 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 RGS7BPQ6MZT1 257 aaPredicted RBP15.32■□□□□ 0.04
SDC2-205ENST00000520233 LILRB1Q8NHL6 650 aaPredicted RBP15.32■□□□□ 0.04
SDC2-205ENST00000520233 SLC25A40Q8TBP6 338 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 RPS4Y2Q8TD47 263 aa15.32■□□□□ 0.04
SDC2-205ENST00000520233 PPP1R14AQ96A00 147 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms