RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CATP04040 527 aaKnown RBP3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RHOXF2BP0C7M4 288 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 CCDC172P0C7W6 258 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 IGHV1-8P0DP01 117 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 PPICP45877 212 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RAB7AP51149 207 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 PSMC5P62195 406 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RPS23P62266 143 aaKnown RBP3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RCAN2Q14206 197 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 FAM83EQ2M2I3 478 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 TSPO2Q5TGU0 170 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 PRMT9Q6P2P2 845 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 C16orf87Q6PH81 154 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 ARHGAP18Q8N392 663 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 ARRDC1Q8N5I2 433 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 TCP10LQ8TDR4 215 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 SRSF12Q8WXF0 261 aaKnown RBP3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 FAM131CQ96AQ9 280 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RCN3Q96D15 328 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 C19orf60Q96EN9 201 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 RHOXF2Q9BQY4 288 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 TM6SF2Q9BZW4 377 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 NAA50Q9GZZ1 169 aaKnown RBP3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 SPNS1Q9H2V7 528 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 TPK1Q9H3S4 243 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 HAUS4Q9H6D7 363 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 FLVCR2Q9UPI3 526 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 DENND4AQ7Z401 1863 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 IGHV5-10-1A0A0J9YXX1 117 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLC16A7O60669 478 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR8U9P0C7N5 309 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 MYL9P24844 172 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 IVDP26440 423 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 SSTR5P35346 364 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 AP1S2P56377 157 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR2B8PP59922 312 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 KDSRQ06136 332 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 UBE2SQ16763 222 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF530Q6P9A1 599 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 CEMP1Q6PRD7 247 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 NCCRP1Q6ZVX7 275 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 LINC01551Q86U37 167 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 CSGALNACT2Q8N6G5 542 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 ASCC1Q8N9N2 400 aaKnown RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR4A15Q8NGL6 344 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR8U1Q8NH10 309 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 PIFOQ8TCI5 191 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 SIKE1Q9BRV8 207 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 STMN4Q9H169 189 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 ARMC7Q9H6L4 198 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 EDA2RQ9HAV5 297 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 MYOZ1Q9NP98 299 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 GTF3C1Q12789 2109 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 MROH7Q68CQ1 1323 aa3.44□□□□□ -1.86
HMGB1P46-201ENST00000520062 AQRO60306 1485 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 A0A0J9YXV3 536 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 HACD1B0YJ81 288 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 C11orf94C9JXX5 98 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 DNASE2O00115 360 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 POLR1CO15160 346 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 NVLO15381 856 aaKnown RBP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 TLX1NBP0CAT3 122 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 CD37P11049 281 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 GABRG2P18507 467 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 HTR1DP28221 377 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 RBM34P42696 430 aaKnown RBP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 DGCR6Q14129 220 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF266Q14584 549 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF829Q3KNS6 432 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 FBXO48Q5FWF7 155 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 TCEAL5Q5H9L2 206 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF786Q8N393 782 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 FAM86B1Q8N7N1 296 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR8K3Q8NH51 312 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR10G6Q8NH81 332 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 TCEAL3Q969E4 200 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 SCGB3A2Q96PL1 93 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 TIMM17AQ99595 171 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 UQCC2Q9BRT2 126 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLC17A9Q9BYT1 436 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 HMG20AQ9NP66 347 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 RGS18Q9NS28 235 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 ADA2Q9NZK5 511 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLC17A7Q9P2U7 560 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 CDC42BPBQ9Y5S2 1711 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
HMGB1P46-201ENST00000520062 SBNO1A3KN83 1393 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 CYSRT1A8MQ03 144 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 TMX2-CTNND1H3BSU7 103 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 LCA5LO95447 670 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 DTYMKP23919 212 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 RAP1AP62834 184 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR6K6Q8NGW6 343 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 ASZ1Q8WWH4 475 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms