RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711		A0A0U1RQV5	110 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	P2RY10	O00398	339 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	DOK2	O60496	412 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	CRYAB	P02511	175 aa	Known RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	B4GALT1	P15291	398 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	IGFBP3	P17936	291 aa	Predicted RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	CCL1	P22362	96 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	AGTR1	P30556	359 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	NTF4	P34130	210 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	PRKX	P51817	358 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	IL18	Q14116	193 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	C3AR1	Q16581	482 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	CCDC92	Q53HC0	331 aa	Predicted RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	PYDC2	Q56P42	97 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	TSPO2	Q5TGU0	170 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	STEAP3	Q658P3	488 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	DRAM2	Q6UX65	266 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF813	Q6ZN06	617 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	DOK3	Q7L591	496 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC16A14	Q7RTX9	510 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	ADGRE4P	Q86SQ3	457 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF100	Q8IYN0	542 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	OR8H2	Q8N162	312 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	OR8B12	Q8NGG6	310 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	LGALS14	Q8TCE9	139 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF775	Q96BV0	537 aa	Predicted RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	FBXO17	Q96EF6	278 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	PGAM5	Q96HS1	289 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	SDHC	Q99643	169 aa	Predicted RBP	10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	GFI1	Q99684	422 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	CLCF1	Q9UBD9	225 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	EXTL2	Q9UBQ6	330 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	STEAP1	Q9UHE8	339 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC5A6	Q9Y289	635 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	TIMM10B	Q9Y5J6	103 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF407	Q9C0G0	2248 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	COL6A6	A6NMZ7	2263 aa		10.49	□□□□□ -0.73
LMNA-224	ENST00000515711	TRAV8-7	A0A075B6U6	113 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	OR6C6	A6NF89	314 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711		M0R135	149 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SS18L1	O75177	396 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	TPPP	O94811	219 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	MAS1	P04201	325 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ERCC1	P07992	297 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC2A2	P11168	524 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SNRPB	P14678	240 aa	Known RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF20	P17024	532 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ELK1	P19419	428 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	UCN	P55089	124 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	TPTE	P56180	551 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	PITPNA	Q00169	270 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	IFITM3	Q01628	133 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SCN1B	Q07699	218 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	OXA1L	Q15070	435 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC36A2	Q495M3	483 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	HACD4	Q5VWC8	232 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	PYHIN1	Q6K0P9	492 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711		Q6ZNX1	250 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	DCDC5	Q6ZRR9	648 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	PGAP1	Q75T13	922 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	LINGO2	Q7L985	606 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	COMMD2	Q86X83	199 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SIAH3	Q8IW03	269 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SERPINA12	Q8IW75	414 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SPACA3	Q8IXA5	215 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	CENPS	Q8N2Z9	138 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	OR52H1	Q8NGJ2	320 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	OR1F12	Q8NHA8	337 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	C15orf40	Q8WUR7	153 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	RAB40A	Q8WXH6	277 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	C10orf35	Q96D05	121 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF837	Q96EG3	531 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF799	Q96GE5	643 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	COX4I2	Q96KJ9	171 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	LIN7B	Q9HAP6	207 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC7A10	Q9NS82	523 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	TAS2R4	Q9NYW5	299 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	MALT1	Q9UDY8	824 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF391	Q9UJN7	358 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	NBPF19	A0A087WUL8	3843 aa		10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	UBR5	O95071	2799 aa	Predicted RBP	10.48	□□□□□ -0.73
LMNA-224	ENST00000515711	RELN	P78509	3460 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC17A2	O00624	439 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	SYNGR3	O43761	229 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	MTRF1	O75570	445 aa	Known RBP	10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	IGLV3-1	P01715	115 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	HLA-DQB1	P01920	261 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	EIF4E	P06730	217 aa	Known RBP	10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	OCM	P0CE72	109 aa	Predicted RBP	10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	COX5B	P10606	129 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	IL7	P13232	177 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	ZNF32	P17041	273 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	ADRA2C	P18825	462 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	CRYGS	P22914	178 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	AZGP1	P25311	298 aa	Known RBP	10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	MAGEB1	P43366	347 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	SLC6A9	P48067	706 aa		10.47	□□□□□ -0.73
LMNA-224	ENST00000515711	PITPNB	P48739	271 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms