RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 GPR21Q99679 349 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 TM6SF2Q9BZW4 377 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 FLVCR2Q9UPI3 526 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 UBIAD1Q9Y5Z9 338 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 ARHGAP21Q5T5U3 1957 aa4.81□□□□□ -1.64
NUP54-215ENST00000514313 CARMIL3Q8ND23 1372 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 OR6C74A6NCV1 312 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 RP2O75695 350 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 PPICP45877 212 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 KIR2DS1Q14954 304 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 OR2W3Q7Z3T1 314 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 DCPSQ96C86 337 aaKnown RBP4.8□□□□□ -1.64
NUP54-215ENST00000514313 TM4SF18Q96CE8 201 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 TMEM175Q9BSA9 504 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 SLIRPQ9GZT3 109 aaKnown RBP4.8□□□□□ -1.64
NUP54-215ENST00000514313 SLC17A7Q9P2U7 560 aa4.8□□□□□ -1.64
NUP54-215ENST00000514313 PCDH11XQ9BZA7 1347 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 A0A096LNJ9 63 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 ERICH4A6NGS2 130 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 HACD1B0YJ81 288 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 TMX2-CTNND1H3BSU7 103 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 ANGPTL7O43827 346 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 CDC40O60508 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
NUP54-215ENST00000514313 GMDSO60547 372 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 SLC16A7O60669 478 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 IVLP07476 585 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 OR8U9P0C7N5 309 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 HOXB8P17481 243 aaPredicted RBP4.79□□□□□ -1.64
NUP54-215ENST00000514313 CACNG7P62955 275 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 SLAQ13239 276 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 ORMDL2Q53FV1 153 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 C6orf183Q5T699 404 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 C16orf87Q6PH81 154 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 GATSQ8NAP1 163 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 OR8U1Q8NH10 309 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 FAM131CQ96AQ9 280 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 EXOSC8Q96B26 276 aaKnown RBP4.79□□□□□ -1.64
NUP54-215ENST00000514313 OR2A5Q96R48 311 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 KIR3DX1Q9H7L2 352 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 ADA2Q9NZK5 511 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 CTSFQ9UBX1 484 aa4.79□□□□□ -1.64
NUP54-215ENST00000514313 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
NUP54-215ENST00000514313 A0A1B0GVX0 72 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 A0A1W2PRF3 423 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 A0A1W2PRM7 423 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 CTSLP07711 333 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 GFAPP14136 432 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 SSTR5P35346 364 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 DRD3P35462 400 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 NDUFA8P51970 172 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 CDKN2DP55273 166 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 SYNJ2BPP57105 145 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 ARG2P78540 354 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 OR8D1Q8WZ84 308 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 BTN2A3PQ96KV6 586 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 IFI27L2Q9H2X8 130 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 TPK1Q9H3S4 243 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
NUP54-215ENST00000514313 SYNDIG1Q9H7V2 258 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 MYOZ1Q9NP98 299 aaPredicted RBP4.78□□□□□ -1.64
NUP54-215ENST00000514313 MED4Q9NPJ6 270 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 RGS18Q9NS28 235 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 STK38LQ9Y2H1 464 aa4.78□□□□□ -1.64
NUP54-215ENST00000514313 CDC42BPBQ9Y5S2 1711 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 IGKV1-8A0A0C4DH67 115 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 A0A0J9YXV3 536 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 PDZK1P1A8MUH7 402 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 ANKRD63C9JTQ0 380 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 GLAP06280 429 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 IVDP26440 423 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 RBM34P42696 430 aaKnown RBP4.77□□□□□ -1.65
NUP54-215ENST00000514313 ATP5J2P56134 94 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 RAP1AP62834 184 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 PAFAH1B2P68402 229 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 IRF4Q15306 451 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 FBXO48Q5FWF7 155 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 PRMT9Q6P2P2 845 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 Q8N7P7 452 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 WDR31Q8NA23 367 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 PIFOQ8TCI5 191 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 CIDECQ96AQ7 238 aaPredicted RBP4.77□□□□□ -1.65
NUP54-215ENST00000514313 SLC25A39Q9BZJ4 359 aaPredicted RBP4.77□□□□□ -1.65
NUP54-215ENST00000514313 AGPAT3Q9NRZ7 376 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 OR12D3Q9UGF7 316 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 FHOD3Q2V2M9 1422 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 PALLDQ8WX93 1383 aa4.77□□□□□ -1.65
NUP54-215ENST00000514313 IGHV3OR16-9A0A0B4J2B5 98 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 GSTTP1A0A1W2PQM5 241 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 ENTPD5O75356 428 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 SLC25A14O95258 325 aaPredicted RBP4.76□□□□□ -1.65
NUP54-215ENST00000514313 ZNF823P16415 610 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 TCN2P20062 427 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 AP1S2P56377 157 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 TSPO2Q5TGU0 170 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 TMEM205Q6UW68 189 aa4.76□□□□□ -1.65
NUP54-215ENST00000514313 NKAIN4Q8IVV8 208 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms