RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 LAMP3Q9UQV4 416 aa17.4■□□□□ 0.38
USP53-208ENST00000514305 ABCA2Q9BZC7 2435 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 F5H5K5 113 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 FAM20BO75063 409 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 ABHD16AO95870 558 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 KRT8P05787 483 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 DCTDP32321 178 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 RIDAP52758 137 aaKnown RBP17.39■□□□□ 0.37
USP53-208ENST00000514305 C6orf141Q5SZD1 244 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 ZNF322Q6U7Q0 402 aaPredicted RBP17.39■□□□□ 0.37
USP53-208ENST00000514305 DRAM2Q6UX65 266 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 FAM220AQ7Z4H9 259 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 ZNF679Q8IYX0 411 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 BPIFB6Q8NFQ5 453 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 LGALS12Q96DT0 336 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 AMBNQ9NP70 447 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 AASSQ9UDR5 926 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 IKZF2Q9UKS7 526 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 GRIP1Q9Y3R0 1128 aa17.39■□□□□ 0.37
USP53-208ENST00000514305 M0R135 149 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 CCDC159P0C7I6 412 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 PIPP12273 146 aaPredicted RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 MYL12AP19105 171 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 NR4A1P22736 598 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 UCP2P55851 309 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 ACTA2P62736 377 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 ACTG2P63267 376 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 RBM48Q5RL73 367 aaKnown RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 ZNF544Q6NX49 715 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 STX19Q8N4C7 294 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 ZNF283Q8N7M2 679 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 ZNF540Q8NDQ6 660 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 HAVCR2Q8TDQ0 301 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 MYDGFQ969H8 173 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 TRMT61AQ96FX7 289 aaKnown RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 ZNF799Q96GE5 643 aa17.38■□□□□ 0.37
USP53-208ENST00000514305 FGF20Q9NP95 211 aaPredicted RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 PNRC2Q9NPJ4 139 aaKnown RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 FBXO9Q9UK97 447 aaPredicted RBP17.38■□□□□ 0.37
USP53-208ENST00000514305 USF3Q68DE3 2245 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 LOC100509620A0A075B734 347 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 SULT1C4O75897 302 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 GLRXP35754 106 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 OPRL1P41146 370 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 SLC6A9P48067 706 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 ROM1Q03395 351 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 MALLQ13021 153 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 SMN1Q16637 294 aaKnown RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 MOGQ16653 247 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 ZNF829Q3KNS6 432 aaPredicted RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 ZNF672Q499Z4 452 aaPredicted RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 APOBEC3DQ96AK3 386 aaPredicted RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 TMEM80Q96HE8 168 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 OR8B4Q96RC9 309 aa17.37■□□□□ 0.37
USP53-208ENST00000514305 CISD1Q9NZ45 108 aaKnown RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 EXOSC1Q9Y3B2 195 aaKnown RBP17.37■□□□□ 0.37
USP53-208ENST00000514305 A0A1W2PQL4 384 aaPredicted RBP17.36■□□□□ 0.37
USP53-208ENST00000514305 ACOD1A6NK06 481 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 ATP6V1G2-DDX39BF2Z307 99 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 H3BSA7 217 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 ICMTO60725 284 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 AVPP01185 164 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 LCKP06239 509 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 CCL2P13500 99 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 CALCRP30988 508 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 HCCSP53701 268 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 MRPL28Q13084 256 aaKnown RBP17.36■□□□□ 0.37
USP53-208ENST00000514305 SNTB2Q13425 540 aaKnown RBP17.36■□□□□ 0.37
USP53-208ENST00000514305 SPATC1Q76KD6 591 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 OR52I1Q8NGK6 324 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 TBX5Q99593 518 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 YTHDF1Q9BYJ9 559 aaKnown RBP17.36■□□□□ 0.37
USP53-208ENST00000514305 ZNF442Q9H7R0 627 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 CMAHPQ9Y471 501 aa17.36■□□□□ 0.37
USP53-208ENST00000514305 FN1P02751 2386 aaKnown RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 METTL15A6NJ78 407 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 SHISA9B4DS77 424 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 APOL3O95236 402 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 LCATP04180 440 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 BMP4P12644 408 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 GCH1P30793 250 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 APOBEC3AP31941 199 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 OTX1P32242 354 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 FABP6P51161 128 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 PRKXP51817 358 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 GALEQ14376 348 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 ZNF718Q3SXZ3 478 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 RGS7BPQ6MZT1 257 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 LRRN1Q6UXK5 716 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 TMPRSS11AQ6ZMR5 421 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 MYPOPQ86VE0 399 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 FBXL14Q8N1E6 418 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 KBTBD8Q8NFY9 601 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 OR10S1Q8NGN2 331 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 OR1J1Q8NGS3 322 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 LILRB1Q8NHL6 650 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 SMAP2Q8WU79 429 aaPredicted RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 GGHQ92820 318 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 DHRS9Q9BPW9 319 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 JAM3Q9BX67 310 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms