RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 DCBLD2Q96PD2 775 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MOGAT1Q96PD6 335 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SOHLH2Q9NX45 425 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 KLK13Q9UKR3 277 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 EMC9Q9Y3B6 208 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MMP24Q9Y5R2 645 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 TMEM14AQ9Y6G1 99 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 HRKO00198 91 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 IGHV4-34P06331 123 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 CD1CP29017 333 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 PLAURQ03405 335 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ZNF345Q14585 488 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 RNF212Q495C1 297 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 OR2B11Q5JQS5 317 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ADGRE4PQ86SQ3 457 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 LURAP1LQ8IV03 231 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 LINC00346Q8IVM7 164 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 OR51F2Q8NH61 342 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 VSTM2LQ96N03 204 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ZNF587Q96SQ5 575 aaPredicted RBP8.65□□□□□ -1.02
VCAN-210ENST00000513960 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 RHPN2P1A8MT19 583 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 UPK3AO75631 287 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 MPIG6BO95866 241 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 CRHP06850 196 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 EIF5AP63241 154 aaKnown RBP8.65□□□□□ -1.02
VCAN-210ENST00000513960 FZD2Q14332 565 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 C14orf28Q4W4Y0 310 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ACTBL2Q562R1 376 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 PEG10Q86TG7 708 aaKnown RBP8.65□□□□□ -1.02
VCAN-210ENST00000513960 KDM8Q8N371 416 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 OR4K15Q8NH41 348 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 AKR7LQ8NHP1 331 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ZNF426Q9BUY5 554 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 ST6GALNAC5Q9BVH7 336 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 PRO1933Q9H354 126 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 SERTAD3Q9UJW9 196 aa8.65□□□□□ -1.02
VCAN-210ENST00000513960 SERINC4A6NH21 518 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 SDCBPO00560 298 aaPredicted RBP8.65□□□□□ -1.03
VCAN-210ENST00000513960 ZNF823P16415 610 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 CXCR1P25024 350 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 GLP1RP43220 463 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 RGS19P49795 217 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 FBXW4P57775 412 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 BTG2P78543 158 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 ZNF141Q15928 474 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 BHLHE23Q8NDY6 225 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 HIST1H2BAQ96A08 127 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 LRFN5Q96NI6 719 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 UTP23Q9BRU9 249 aaKnown RBP8.65□□□□□ -1.03
VCAN-210ENST00000513960 OR51M1Q9H341 326 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 B9D1Q9UPM9 204 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 DTX4Q9Y2E6 619 aa8.65□□□□□ -1.03
VCAN-210ENST00000513960 P2RY10O00398 339 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 MBTPS2O43462 519 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 GLI4P10075 376 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 EIF2S3P41091 472 aaKnown RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 CCR5P51681 352 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 RAB32Q13637 225 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 AWAT2Q6E213 333 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 TMEM225Q6GV28 225 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 MISPQ8IVT2 679 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 OR4C3Q8NH37 302 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ADAMTS18Q8TE60 1221 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 C4orf45Q96LM5 186 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 IP6K3Q96PC2 410 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 OR10A5Q9H207 317 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 KCNJ16Q9NPI9 418 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 OR5AC2Q9NZP5 309 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 LPAR3Q9UBY5 353 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 TDRD6O60522 2096 aaKnown RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 A0A1W2PPC1 479 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ZNF354AO60765 605 aaPredicted RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 CLN5O75503 358 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 GIMD1P0DJR0 217 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 SLC25A4P12235 298 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 LPAR6P43657 344 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ZP2Q05996 745 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 SLC18B1Q6NT16 456 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 PPP1R3BQ86XI6 285 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 PRSS35Q8N3Z0 413 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ZSCAN4Q8NAM6 433 aaPredicted RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 TMEM104Q8NE00 496 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 C16orf52Q8NHV5 167 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 SLAMF9Q96A28 289 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 RAB33BQ9H082 229 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ZNF700Q9H0M5 742 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 PRODH2Q9UF12 536 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 WIF1Q9Y5W5 379 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ATG2AQ2TAZ0 1938 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 TEX13DA0A0J9YY54 714 aaPredicted RBP8.64□□□□□ -1.03
VCAN-210ENST00000513960 C7orf77A4D0Y5 90 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 BLACEA4D250 179 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 ZNF878C9JN71 531 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 IFNA17P01571 189 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 AMY2BP19961 511 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 KIR3DL2P43630 455 aa8.64□□□□□ -1.03
VCAN-210ENST00000513960 CYCSP99999 105 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms