RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 DPY19L4Q7Z388 723 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 AMIGO2Q86SJ2 522 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZDHHC13Q8IUH4 622 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 CPOQ8IVL8 374 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZNF283Q8N7M2 679 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 BBS1Q8NFJ9 593 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 OTOSQ8NHW6 89 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SLAMF6Q96DU3 332 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZNF799Q96GE5 643 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 INTS14Q96SY0 518 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 AMELYQ99218 206 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 KCNJ15Q99712 375 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ABHD6Q9BV23 337 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 OSBPL10Q9BXB5 764 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SAP30LQ9HAJ7 183 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 IL19Q9UHD0 177 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZNF878C9JN71 531 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PRR23D1E9PI22 279 aaPredicted RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 MLNRO43193 412 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PRKYO43930 277 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 TIMM8AO60220 97 aaPredicted RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 FSTL3O95633 263 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 PRR23D2P0DMB1 279 aaPredicted RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 ALOX5APP20292 161 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PAICSP22234 425 aaKnown RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 POLR2IP36954 125 aaKnown RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 GPR6P46095 362 aaPredicted RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 CDH15P55291 814 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 KPNB1Q14974 876 aaKnown RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 CARTPTQ16568 116 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 TSTQ16762 297 aaKnown RBP8.21□□□□□ -1.1
RNF4-221ENST00000513643 OR2T2Q6IF00 324 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 CCDC121Q6ZUS5 278 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 SHFQ7M4L6 423 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 OR6K6Q8NGW6 343 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 CLDND2Q8NHS1 167 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 SPTSSAQ969W0 71 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 ELMOD3Q96FG2 381 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 SIGLEC11Q96RL6 698 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 TEAD3Q99594 435 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PKP2Q99959 881 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 GABARAPL3Q9BY60 117 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 OR51V1Q9H2C8 321 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 TOR3AQ9H497 397 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 DECR2Q9NUI1 292 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 HAO2Q9NYQ3 351 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 PTTG3PQ9NZH4 202 aa8.21□□□□□ -1.1
RNF4-221ENST00000513643 EBAG9O00559 213 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 CDC14BO60729 498 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 CIB2O75838 187 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 LCATP04180 440 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 SPARCP09486 303 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 SELEP16581 610 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 GATA4P43694 442 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 RAD23AP54725 363 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 GRB2P62993 217 aaKnown RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 TNFAIP6P98066 277 aaPredicted RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZNF92Q03936 586 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 MAB21L1Q13394 359 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 SNAPC1Q16533 368 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZFP1Q6P2D0 407 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 CXXC5Q7LFL8 322 aaKnown RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 ERI1Q8IV48 349 aaKnown RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 OR13G1Q8NGZ3 307 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 PYDC1Q8WXC3 89 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 SGK3Q96BR1 496 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZMYND19Q96E35 227 aaPredicted RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZNF582Q96NG8 517 aaPredicted RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 CIB1Q99828 191 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 EGLN1Q9GZT9 426 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 GCM1Q9NP62 436 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 YAE1D1Q9NRH1 226 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 KRT84Q9NSB2 600 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 DCAF16Q9NXF7 216 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 TVP23BQ9NYZ1 205 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 USE1Q9NZ43 259 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.2□□□□□ -1.1
RNF4-221ENST00000513643 ZNF319Q9P2F9 582 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 OAZ3Q9UMX2 235 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 KLHDC2Q9Y2U9 406 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 WIPI2Q9Y4P8 454 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 STAB1Q9NY15 2570 aa8.2□□□□□ -1.1
RNF4-221ENST00000513643 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 CD300LBA8K4G0 201 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 PRR32B1ATL7 298 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 FAM157AC9JC47 383 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 H0YL77 283 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 PPIHO43447 177 aaKnown RBP8.19□□□□□ -1.1
RNF4-221ENST00000513643 SELENOFO60613 162 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 LMX1BO60663 402 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 IGHV2-70P01814 119 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 ALPLP05186 524 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
RNF4-221ENST00000513643 IGFBP5P24593 272 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 PMELP40967 661 aa8.19□□□□□ -1.1
RNF4-221ENST00000513643 SLC15A1P46059 708 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms