RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 Q6ZS92 163 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 RPS27LQ71UM5 84 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 TRMT10CQ7L0Y3 403 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 TMEM17Q86X19 198 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 ACOT4Q8N9L9 421 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 OR2L5Q8NG80 312 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 OR5L2Q8NGL0 311 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 IMMP1LQ96LU5 166 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 GPA33Q99795 319 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 MAPKAP1Q9BPZ7 522 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 HES7Q9BYE0 225 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 SHCBP1LQ9BZQ2 653 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 IQCGQ9H095 443 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 CENPHQ9H3R5 247 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 ELOVL6Q9H5J4 265 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 RPF2Q9H7B2 306 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 ZNF275Q9NSD4 429 aaPredicted RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 ZNF446Q9NWS9 450 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 NMRK1Q9NWW6 199 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 DCDC2Q9UHG0 476 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 FIS1Q9Y3D6 152 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 ACACBO00763 2458 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 DMDP11532 3685 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 KNTC1P50748 2209 aa3.21□□□□□ -1.89
HTT-210ENST00000512909 MAP1BP46821 2468 aaKnown RBP3.21□□□□□ -1.89
HTT-210ENST00000512909 LAMA1P25391 3075 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 SDK2Q58EX2 2172 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 IGLV3-12A0A075B6K2 115 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 A0A1B0GUH1 482 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 GNG14A0A1W2PPG7 69 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 FAM166BA8MTA8 275 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 F8WDY8 70 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 RAMP1O60894 148 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 OR2J2O76002 312 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 TOXO94900 526 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 OR4F21O95013 312 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 DUSP14O95147 198 aaKnown RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 SLC2A10O95528 541 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 OTCP00480 354 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 PDYNP01213 254 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 IGKV3-15P01624 115 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 KRT6AP02538 564 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 KRT6BP04259 564 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 P04436 131 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 SMIM10L1P0DMW3 83 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MYL2P10916 166 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 LAMP1P11279 417 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 HIST1H1TP22492 207 aaPredicted RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 PTBP1P26599 531 aaKnown RBP eCLIP3.21□□□□□ -1.9
HTT-210ENST00000512909 SERPINB1P30740 379 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 KRT6CP48668 564 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 HLCSP50747 726 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 XKP51811 444 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 HSD17B7P56937 341 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MLF1P58340 268 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 ASPHQ12797 758 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 IMPG1Q17R60 797 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 GLYR1Q49A26 553 aaPredicted RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 METTL11BQ5VVY1 283 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 ZCCHC12Q6PEW1 402 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 PAGE2Q7Z2X7 111 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 ZNF573Q86YE8 665 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 CYP4Z2PQ8N1L4 340 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 BPIFB2Q8N4F0 458 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 ZNF321PQ8N8H1 164 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 ST6GALNAC3Q8NDV1 305 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 B3GNT7Q8NFL0 401 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 OR4F6Q8NGB9 312 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 OR4K14Q8NGD5 310 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 RHEBL1Q8TAI7 183 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 DCAKDQ8WVC6 231 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 PSMF1Q92530 271 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 UCN3Q969E3 161 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 SMIM10Q96HG1 83 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MAGEB18Q96M61 343 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 SERPINI1Q99574 410 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MRPL57Q9BQC6 102 aaKnown RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 SLC30A2Q9BRI3 323 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 EHD1Q9H4M9 534 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MIEF1Q9NQG6 463 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 MS4A12Q9NXJ0 267 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 TMEM216Q9P0N5 145 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 PHF11Q9UIL8 331 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 PSME2Q9UL46 239 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 TMCO1Q9UM00 188 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 SNX6Q9UNH7 406 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 YARS2Q9Y2Z4 477 aaKnown RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 MMACHCQ9Y4U1 282 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 TIMM22Q9Y584 194 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 FLVCR1Q9Y5Y0 555 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 ZNF780BQ9Y6R6 833 aa3.21□□□□□ -1.9
HTT-210ENST00000512909 V9GYY5 206 aaPredicted RBP3.21□□□□□ -1.9
HTT-210ENST00000512909 CHD8Q9HCK8 2581 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 COL27A1Q8IZC6 1860 aaPredicted RBP3.2□□□□□ -1.9
HTT-210ENST00000512909 A0A0U1RQV5 110 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 SAGE2PA6NJ88 616 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 OR6C65A6NJZ3 312 aa3.2□□□□□ -1.9
HTT-210ENST00000512909 DHRS7CA6NNS2 312 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms