RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PCSK6	P29122	969 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	KIR3DL2	P43630	455 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	MAP2K4	P45985	399 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	NANOS3	P60323	173 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	GRB2	P62993	217 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	EGR3	Q06889	387 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	ECH1	Q13011	328 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	HNRNPA0	Q13151	305 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	TNK1	Q13470	666 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	TAF13	Q15543	124 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	KLHL22	Q53GT1	634 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	GLYATL3	Q5SZD4	288 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	LIPN	Q5VXI9	398 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	FAM57B	Q71RH2	274 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	TMEM200A	Q86VY9	491 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	PRSS35	Q8N3Z0	413 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF540	Q8NDQ6	660 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	IL17RD	Q8NFM7	739 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	OR8B12	Q8NGG6	310 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	OR1J2	Q8NGS2	313 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	OR1J1	Q8NGS3	322 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	ASB17	Q8WXJ9	295 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	PELI1	Q96FA3	418 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	C4orf36	Q96KX1	117 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	MNT	Q99583	582 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	DOK1	Q99704	481 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	MRPL37	Q9BZE1	423 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	OR2J1	Q9GZK6	312 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	CA10	Q9NS85	328 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	TMEM14A	Q9Y6G1	99 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	EFCAB10	A6NFE3	127 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	SNTN	A6NMZ2	147 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	FADS2	O95864	444 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	LCAT	P04180	440 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	CCDC159	P0C7I6	412 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	DANCR	P0C864	163 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	GLRX	P35754	106 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	RBMX	P38159	391 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	GTF2A1	P52655	376 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	TPTE	P56180	551 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	PSMA6	P60900	246 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	PPP1CB	P62140	327 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF92	Q03936	586 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	DRAM2	Q6UX65	266 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	YIPF7	Q8N8F6	280 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	SGK3	Q96BR1	496 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	DCLRE1C	Q96SD1	692 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	SYT3	Q9BQG1	590 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	PPP1R3E	Q9H7J1	279 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC24A3	Q9HC58	644 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	MOV10	Q9HCE1	1003 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	TBCCD1	Q9NVR7	557 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	GNG8	Q9UK08	70 aa		12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	LSM2	Q9Y333	95 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-238	ENST00000512107	TTR	P02766	147 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	LCK	P06239	509 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	ANXA2	P07355	339 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	OR4A8	P0C604	315 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	DCK	P27707	260 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	HSD11B1	P28845	292 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC6A9	P48067	706 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	FABP6	P51161	128 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	RIDA	P52758	137 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	PSG7	Q13046	419 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	MED21	Q13503	144 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	WDR38	Q5JTN6	314 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	RBM48	Q5RL73	367 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	C11orf71	Q6IPW1	123 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	KCTD18	Q6PI47	426 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	DEGS2	Q6QHC5	323 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	RHOU	Q7L0Q8	258 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	CATSPERD	Q86XM0	798 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	SNX33	Q8WV41	574 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	SPTSSA	Q969W0	71 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	OR5M11	Q96RB7	305 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	DHRS9	Q9BPW9	319 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	KCNS3	Q9BQ31	491 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	POU2F3	Q9UKI9	436 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107		R4GMQ9	66 aa		12.47	□□□□□ -0.41
MATR3-238	ENST00000512107	APC	P25054	2843 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107		A0A1B0GTI1	187 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	TMEM269	A0A1B0GVZ9	245 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	TRIM64	A6NGJ6	449 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107		H3BSH0	61 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	PHYH	O14832	338 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	LMX1B	O60663	402 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF254	O75437	659 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	SULT1C4	O75897	302 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	IGLV3-1	P01715	115 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF250	P15622	560 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	SSTR2	P30874	369 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ACTC1	P68032	377 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ACTA1	P68133	377 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	GK2	Q14410	553 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	SWI5	Q1ZZU3	235 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	SPRN	Q5BIV9	151 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	RDH10	Q8IZV5	341 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms