RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 MPV17P39210 176 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 PRKXP51817 358 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 CXCR4P61073 352 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 ADARB1P78563 741 aaKnown RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 ROM1Q03395 351 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 EGR3Q06889 387 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 MAD2L1BPQ15013 274 aaPredicted RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 Q5PR19 223 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 SHEQ5VZ18 495 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 LRRN1Q6UXK5 716 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 FBXW12Q6X9E4 464 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 C8orf59Q8N0T1 100 aaPredicted RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 OR10H4Q8NGA5 316 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 OR52H1Q8NGJ2 320 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 OR2T27Q8NH04 317 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 NRG4Q8WWG1 115 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 RNFT2Q96EX2 444 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 VRK1Q99986 396 aaPredicted RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 CYSLTR2Q9NS75 346 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 PTTG3PQ9NZH4 202 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 TAAR3PQ9P1P4 343 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.65
COL6A6-203ENST00000511332 IKZF2Q9UKS7 526 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 COPS3Q9UNS2 423 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 STARD10Q9Y365 291 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 LRP12Q9Y561 859 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 HSPE1-MOB4S4R3N1 261 aa11.02□□□□□ -0.65
COL6A6-203ENST00000511332 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 USF3Q68DE3 2245 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 XRCC2O43543 280 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 TIMM8AO60220 97 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 IGHV4-39P01824 125 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ADRA2AP08913 450 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 DBTP11182 482 aaKnown RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 SELEP16581 610 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 KITLGP21583 273 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 DCTDP32321 178 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ALDH3B1P43353 468 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 HSPA13P48723 471 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 RIDAP52758 137 aaKnown RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 EFNA4P52798 201 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 HCCSP53701 268 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF829Q3KNS6 432 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF322Q6U7Q0 402 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 PRSS57Q6UWY2 283 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 MRPL21Q7Z2W9 205 aaKnown RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF679Q8IYX0 411 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 SORCS2Q96PQ0 1159 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 OR8B4Q96RC9 309 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 MYCBPQ99417 103 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 POFUT1Q9H488 388 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 PURGQ9UJV8 347 aaKnown RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 RPL36Q9Y3U8 105 aaKnown RBP11.01□□□□□ -0.65
COL6A6-203ENST00000511332 MAST4O15021 2626 aa11.01□□□□□ -0.65
COL6A6-203ENST00000511332 TBX1O43435 398 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 APOL3O95236 402 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 CLIC3O95833 236 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 KRT8P05787 483 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 CSF3P09919 207 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 SLC2A1P11166 492 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 CFL1P23528 166 aaKnown RBP11□□□□□ -0.65
COL6A6-203ENST00000511332 AQP4P55087 323 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF121P58317 390 aaPredicted RBP11□□□□□ -0.65
COL6A6-203ENST00000511332 RAB40BQ12829 278 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 PSG7Q13046 419 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 PCGF3Q3KNV8 242 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 FAM220AQ7Z4H9 259 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 RFLNBQ8N5W9 214 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 APH1BQ8WW43 257 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
COL6A6-203ENST00000511332 HAVCR1Q96D42 359 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 CMBLQ96DG6 245 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 MRPL48Q96GC5 212 aaKnown RBP11□□□□□ -0.65
COL6A6-203ENST00000511332 TBX5Q99593 518 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 TTTY10Q9BZA0 68 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 OR10A2Q9H208 303 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 MOB1AQ9H8S9 216 aa11□□□□□ -0.65
COL6A6-203ENST00000511332 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
COL6A6-203ENST00000511332 A0A1W2PQL4 384 aaPredicted RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 IRGMA1A4Y4 181 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 ACOD1A6NK06 481 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 C17orf100A8MU93 164 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 WBP4O75554 376 aaKnown RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 NAT2P11245 290 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 ZNF81P51508 661 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 MMP15P51511 669 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 GK2Q14410 553 aaPredicted RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 HLXQ14774 488 aaPredicted RBP10.99□□□□□ -0.65
COL6A6-203ENST00000511332 TESK1Q15569 626 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 TIGD6Q17RP2 521 aa10.99□□□□□ -0.65
COL6A6-203ENST00000511332 ALKBH6Q3KRA9 238 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms