RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	ZNF181	Q2M3W8	571 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	LINC01590	Q5TEZ4	76 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	PAPD5	Q8NDF8	572 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	PROKR2	Q8NFJ6	384 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	OR2T33	Q8NG76	320 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	GIPC3	Q8TF64	312 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	CANT1	Q8WVQ1	401 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	OR2V2	Q96R30	315 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	FEV	Q99581	238 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	HCAR1	Q9BXC0	346 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	TMPRSS13	Q9BYE2	586 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	WDR76	Q9H967	626 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	LPAR2	Q9HBW0	351 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081	COMMD3-BMI1	R4GMX3	469 aa		10.22	□□□□□ -0.77
CLDND1-223	ENST00000511081		A0A0A6YYJ9	748 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TVP23A	A6NH52	213 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081		F5H0A9	414 aa	Predicted RBP	10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081		H0YL77	283 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	CST1	P01037	141 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	HLA-DQA2	P01906	255 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	SBK2	P0C263	348 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	FMO3	P31513	532 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	GATA4	P43694	442 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	SLC6A9	P48067	706 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	BLVRA	P53004	296 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	LIPN	Q5VXI9	398 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	LYPD4	Q6UWN0	246 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	DRAM2	Q6UX65	266 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	RHOU	Q7L0Q8	258 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TMEM179B	Q7Z7N9	219 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	OR5AS1	Q8N127	324 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TEX29	Q8N6K0	151 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	CELF2-AS1	Q8N7Q2	184 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	ATG16L2	Q8NAA4	619 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	ZNF511	Q8NB15	262 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	OR10G2	Q8NGC3	310 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	OR51L1	Q8NGJ5	315 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	BCAS4	Q8TDM0	211 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	ST7L	Q8TDW4	575 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	SPTSSA	Q969W0	71 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	FAHD2A	Q96GK7	314 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	MEGF10	Q96KG7	1140 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	LRGUK	Q96M69	825 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	GAL3ST1	Q99999	423 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	NIPSNAP1	Q9BPW8	284 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	REPIN1	Q9BWE0	567 aa	Known RBP	10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	MARCH7	Q9H992	704 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	PATZ1	Q9HBE1	687 aa	Known RBP	10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TMEM165	Q9HC07	324 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TBC1D23	Q9NUY8	699 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	TMEM100	Q9NV29	134 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	ARMC1	Q9NVT9	282 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081	OPN4	Q9UHM6	478 aa		10.21	□□□□□ -0.77
CLDND1-223	ENST00000511081		A0A0G2JMP0	313 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081		A0A0X1KG70	313 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	TCRBV3S1	A0A5B6	114 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	DHRS12	A0PJE2	317 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081		M0R135	149 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZNF593	O00488	134 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	TCF21	O43680	179 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	SOX14	O95416	240 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	PTBP3	O95758	552 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	FSHB	P01225	129 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	LCAT	P04180	440 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	WNT2	P09544	360 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZFP36	P26651	326 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	GRK5	P34947	590 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	RBMX	P38159	391 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	PMEL	P40967	661 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	RPS27	P42677	84 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	SRP9	P49458	86 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ENTPD1	P49961	510 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	BTG1	P62324	171 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	CDK5	Q00535	292 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	MALL	Q13021	153 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	HNRNPA0	Q13151	305 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZMYND11	Q15326	602 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	TUSC1	Q2TAM9	212 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	DNAL1	Q4LDG9	190 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	DOCK11	Q5JSL3	2073 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	DCXR	Q7Z4W1	244 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	SPIC	Q8N5J4	248 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	OR4M2	Q8NGB6	313 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	OR9Q1	Q8NGQ5	310 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ERGIC1	Q969X5	290 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	SLCO4A1	Q96BD0	722 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	CCDC124	Q96CT7	223 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZNF799	Q96GE5	643 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	KCNJ15	Q99712	375 aa		10.2	□□□□□ -0.78
CLDND1-223	ENST00000511081	C5orf63	A6NC05	138 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	CD300LB	A8K4G0	201 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081		A8MXK9	166 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	GYG2	O15488	501 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	FOXH1	O75593	365 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	IFNG	P01579	166 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	GYPB	P06028	91 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	CLU	P10909	449 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	ANOS1	P23352	680 aa		10.19	□□□□□ -0.78
CLDND1-223	ENST00000511081	CD200	P41217	278 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms