RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
RAB40C-202ENST00000509637 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 MRPL22Q9NWU5 206 aaKnown RBP13.19□□□□□ -0.3
RAB40C-202ENST00000509637 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 J3QW42 95 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 IFNL4K9M1U5 179 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
RAB40C-202ENST00000509637 CPT2P23786 658 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 GGT2P36268 569 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 CD200P41217 278 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 RGS6P49758 472 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 SLC7A2P52569 658 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 OLFML2AQ68BL7 652 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 GPR139Q6DWJ6 353 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 DCDC5Q6ZRR9 648 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 MAP6Q96JE9 813 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 COG8Q96MW5 612 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 SIRPDQ9H106 197 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 FN3KQ9H479 309 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
RAB40C-202ENST00000509637 A0A1B0GW55 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 F5H5K5 113 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 NDUFA7O95182 113 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 KNG1P01042 644 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
RAB40C-202ENST00000509637 RPS27P42677 84 aaKnown RBP13.17□□□□□ -0.3
RAB40C-202ENST00000509637 POU4F2Q12837 409 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DGCR6Q14129 220 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
RAB40C-202ENST00000509637 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 FKBP9P1Q75LS8 142 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 GJC3Q8NFK1 279 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 OR5L1Q8NGL2 311 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 PLEKHA8Q96JA3 519 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DHRS1Q96LJ7 313 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DDOQ99489 341 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 PCGF1Q9BSM1 259 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 HDHD2Q9H0R4 259 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 ANKRD19PQ9H560 264 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
RAB40C-202ENST00000509637 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 OR6C68A6NDL8 312 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 PHYHO14832 338 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 PTBP3O95758 552 aaKnown RBP13.16□□□□□ -0.3
RAB40C-202ENST00000509637 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 H1F0P07305 194 aaKnown RBP13.16□□□□□ -0.3
RAB40C-202ENST00000509637 HIST1H1CP16403 213 aaKnown RBP13.16□□□□□ -0.3
RAB40C-202ENST00000509637 CA6P23280 308 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 CENPAP49450 140 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 DLX1P56177 255 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 ZNF92Q03936 586 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 PRB3Q04118 309 aaPredicted RBP13.16□□□□□ -0.3
RAB40C-202ENST00000509637 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
RAB40C-202ENST00000509637 PPP1R3EQ9H7J1 279 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 CYB5R1Q9UHQ9 305 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 TMEM5Q9Y2B1 443 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 CAPN7Q9Y6W3 813 aa13.16□□□□□ -0.3
RAB40C-202ENST00000509637 ZNF879B4DU55 563 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 COX4I1P13073 169 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 IFNA8P32881 189 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 PROK1P58294 105 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
RAB40C-202ENST00000509637 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
RAB40C-202ENST00000509637 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 OR2AE1Q8NHA4 323 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 SEMA6AQ9H2E6 1030 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 BEX1Q9HBH7 125 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 NOX4Q9NPH5 578 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
RAB40C-202ENST00000509637 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 CD300LBA8K4G0 201 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 LGALS8O00214 317 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms