RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF319Q9P2F9 582 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 AASSQ9UDR5 926 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 ATPIF1Q9UII2 106 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 KLHL21Q9UJP4 597 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 BAIAP2Q9UQB8 552 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 STARD10Q9Y365 291 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 CMAHPQ9Y471 501 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 TIMM10BQ9Y5J6 103 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 NIPBLQ6KC79 2804 aaeCLIP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 YLPM1P49750 1951 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 SHISA3A0PJX4 238 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 EBAG9O00559 213 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 GNGT2O14610 69 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 MLNRO43193 412 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CIB2O75838 187 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 GLCEO94923 617 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 STAMBPO95630 424 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 LY6G6DO95868 133 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 IGHV1-46P01743 117 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 IGHV3-13P01766 116 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 MRPL3P09001 348 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 SPARCP09486 303 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 SLC2A1P11166 492 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 ANXA8P13928 327 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CD99P14209 185 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 SELEP16581 610 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 PAX7P23759 505 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 IGFBP5P24593 272 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 FASP25445 335 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 APLNRP35414 380 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 NAA10P41227 235 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CENPAP49450 140 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 ENTPD1P49961 510 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 GDI2P50395 445 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 RASSF2P50749 326 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 EFNA4P52798 201 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 HCCSP53701 268 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 PPP1CBP62140 327 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 SNRPD2P62316 118 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 PSG7Q13046 419 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 MBNL2Q5VZF2 373 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 TMEM154Q6P9G4 183 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 DNM1P34Q6PK57 102 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 Q71RC1 249 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 SSX6Q7RTT6 188 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 DCXRQ7Z4W1 244 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CPOQ8IVL8 374 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 ICA1LQ8NDH6 482 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 OR6N2Q8NGY6 317 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 OR2T4Q8NH00 348 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 OR2AE1Q8NHA4 323 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 POP5Q969H6 163 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 UBE2FQ969M7 185 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 CENPNQ96H22 339 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 C4orf45Q96LM5 186 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 KCNS3Q9BQ31 491 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 TTTY10Q9BZA0 68 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 BPESC1Q9GZL8 116 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 NDEL1Q9GZM8 345 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 HDHD2Q9H0R4 259 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 C1orf198Q9H425 327 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 FAIMQ9NVQ4 179 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 PTTG3PQ9NZH4 202 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 TAAR3PQ9P1P4 343 aa6.12□□□□□ -1.43
TOPBP1-207ENST00000509162 C2CD3Q4AC94 2353 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 IQCMA0A1B0GVH7 501 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 A0A1B0GWJ7 208 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 A0A1W2PPW3 197 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 RIIAD1A6NNX1 92 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 KIAA1324LA8MWY0 1029 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 G3V2T6 193 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 M0R233 179 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 MAGEB4O15481 346 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 APOL3O95236 402 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ABHD16AO95870 558 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 LCKP06239 509 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 INHBBP09529 407 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF3P17036 446 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 HOXB6P17509 224 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 GABRB1P18505 474 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 OPRL1P41146 370 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 EVX1P49640 407 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 NUDT6P53370 316 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 KLF3P57682 345 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 GALK2Q01415 458 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 MFGE8Q08431 387 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 RIN1Q13671 783 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 APOFQ13790 326 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 GGTLC2Q14390 218 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 TEX30Q5JUR7 227 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 GLYATL3Q5SZD4 288 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 CXXC5Q7LFL8 322 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 SHFQ7M4L6 423 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 DPY19L4Q7Z388 723 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 HIPK1Q86Z02 1210 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ERI1Q8IV48 349 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms