RNA–Protein interactions for RNA: ENST00000508394.6

SMUG1-215, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, human

APPRIS P1 TSL 2 BASIC

Gene SMUG1, Length 1,697 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMUG1-215	ENST00000508394	APOBEC3D	Q96AK3	386 aa	Predicted RBP	18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	C4orf36	Q96KX1	117 aa		18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF649	Q9BS31	505 aa		18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	C1QTNF5	Q9BXJ0	243 aa		18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	LIME1	Q9H400	295 aa		18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	CLEC2D	Q9UHP7	191 aa		18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	DIMT1	Q9UNQ2	313 aa	Known RBP	18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394	ANKRD17	O75179	2603 aa	Known RBP	18.7	■□□□□ 0.58
SMUG1-215	ENST00000508394		J3QLW9	94 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ICMT	O60725	284 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF254	O75437	659 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	OR4A8	P0C604	315 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	LIMS3	P0CW19	117 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	LIMS4	P0CW20	117 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF19	P17023	458 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	MYL12A	P19105	171 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	PSMB10	P40306	273 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	RGS6	P49758	472 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	PSMA6	P60900	246 aa	Known RBP	18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CSNK2B	P67870	215 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	MFGE8	Q08431	387 aa	Predicted RBP	18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ADIPOQ	Q15848	244 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	GFOD2	Q3B7J2	385 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	UNQ6126/PRO20091	Q6UXV3	157 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	FAM220A	Q7Z4H9	259 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	LRP11	Q86VZ4	500 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	OR2AE1	Q8NHA4	323 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	DHRS9	Q9BPW9	319 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	SYT3	Q9BQG1	590 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ISG20L2	Q9H9L3	353 aa	Known RBP	18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	FKBP14	Q9NWM8	211 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	DUSP13	Q9UII6	198 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	TPRKB	Q9Y3C4	175 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CSMD1	Q96PZ7	3565 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	TMEM269	A0A1B0GVZ9	245 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CCDC159	P0C7I6	412 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CRHBP	P24387	322 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	MPV17	P39210	176 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	RPS23	P62266	143 aa	Known RBP	18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	HLX	Q14774	488 aa	Predicted RBP	18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CDON	Q4KMG0	1287 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	LIPN	Q5VXI9	398 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	COLCA1	Q6ZS62	124 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	PGAM5	Q96HS1	289 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	NIPAL2	Q9H841	368 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	INPP5E	Q9NRR6	644 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	ERVK-18	Q9QC07	812 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	CMAHP	Q9Y471	501 aa		18.69	■□□□□ 0.58
SMUG1-215	ENST00000508394	SULT1C4	O75897	302 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	CLPTM1	O96005	669 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	PNP	P00491	289 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	APOBEC3A	P31941	199 aa	Predicted RBP	18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	ACTA2	P62736	377 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	ACTG2	P63267	376 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	OR2G6	Q5TZ20	316 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	PRSS45	Q7RTY3	260 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	PPP1R14A	Q96A00	147 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	MRPL37	Q9BZE1	423 aa	Known RBP	18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF442	Q9H7R0	627 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF319	Q9P2F9	582 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	EXOSC1	Q9Y3B2	195 aa	Known RBP	18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	LRRC42	Q9Y546	428 aa		18.68	■□□□□ 0.58
SMUG1-215	ENST00000508394	APOC1	P02654	83 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	CDK1	P06493	297 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	SOD3	P08294	240 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	TTK	P33981	857 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	SERPINF1	P36955	418 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	SLC35A2	P78381	396 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF829	Q3KNS6	432 aa	Predicted RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	RBM48	Q5RL73	367 aa	Known RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	FBXL14	Q8N1E6	418 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	MUC15	Q8N387	334 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	KLF14	Q8TD94	323 aa	Predicted RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	IPCEF1	Q8WWN9	437 aa	Predicted RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	MARS2	Q96GW9	593 aa	Known RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	JAM3	Q9BX67	310 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	FAM206A	Q9NX38	181 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	CHCHD3	Q9NX63	227 aa	Known RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	MYEF2	Q9P2K5	600 aa	Known RBP	18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	LAMP3	Q9UQV4	416 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	ARFGEF3	Q5TH69	2177 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	USF3	Q68DE3	2245 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	NOTCH2	Q04721	2471 aa		18.67	■□□□□ 0.58
SMUG1-215	ENST00000508394	EEF1B2	P24534	225 aa	Known RBP	18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	GLYATL3	Q5SZD4	288 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF544	Q6NX49	715 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	ZNF611	Q8N823	705 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	OR5L1	Q8NGL2	311 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	RORB	Q92753	470 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	MYDGF	Q969H8	173 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	MRPL24	Q96A35	216 aa	Known RBP	18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	MRPL48	Q96GC5	212 aa	Known RBP	18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	CCDC90B	Q9GZT6	254 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394		R4GMQ9	66 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	LOC110117498-PIK3R3	F6TDL0	507 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	SRSF10	O75494	262 aa	Known RBP	18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	ATE1	O95260	518 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	MALL	Q13021	153 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	ODF4	Q2M2E3	257 aa		18.66	■□□□□ 0.58
SMUG1-215	ENST00000508394	ALKBH6	Q3KRA9	238 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms